Sordaria macrospora: 10801954
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Entry
10801954 CDS
T01610
Symbol
SMAC4_07216
Name
(RefSeq) uncharacterized protein
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
smp
Sordaria macrospora
Pathway
smp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
10801954 (SMAC4_07216)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smp03021
]
10801954 (SMAC4_07216)
03019 Messenger RNA biogenesis [BR:
smp03019
]
10801954 (SMAC4_07216)
Transcription machinery [BR:
smp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
10801954 (SMAC4_07216)
Messenger RNA biogenesis [BR:
smp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
10801954 (SMAC4_07216)
U7-dependent histone pre-mRNA processing factors
10801954 (SMAC4_07216)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B
Lactamase_B_6
Anti-Pycsar_Apyc1
Lactamase_B_2
RMMBL
Lactamase_B_3
AF_2048_N
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
10801954
NCBI-ProteinID:
XP_003344648
UniProt:
F7W805
LinkDB
All DBs
Position
5:complement(join(711640..712139,712206..714031,714428..714525,714595..714744))
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AA seq
857 aa
AA seq
DB search
MASKRKASAMATEPEEPVDPADELMFLNLGGGNEVGRSCHIIQYKGKTVMLDAGQHPAYD
GLAALPFFDDFDLSTVDVLLISHFHIDHAASLPYVLAKTNFRGRVFMTHATKAIYKWLIQ
DSVRVGNTSSNPTSSLVYTEEDHLKTFPMIEAIDYNTTHTISSIRITPYPAGHVLGAAMF
LIEIAGLKIFFTGDYSREEDRHLISAEVPKGVKIDVLITESTYGIASHIPRVEREQALMK
SITGILNRGGRVLMPVFALGRAQELLLILDEYWGKHAEFQKYPIYYASNLARKCMLVYQT
YVGSMNDNIKRLFRERLAESESSGDGAGKGGPWDFKFIRSLKSIDRFEDVGGCVMLASPG
MLQNGVSRELLERWAPSEKNGVIITGYSVEGTMAKHIMQEPDTIQAVMSRNIAGARRGPG
GGGDAEKVMIPRRCTVQEFSFAAHVDGVENREFIEEVAAPVVILVHGEVHNMMRLKSKLL
SLNANKEHKVKVFSPKNCEELRIPFKTDKVAKVVGKLAAIPPALKEAKNSHDGPLPSSEP
QLITGVLVQNDFKMSLMAPEDLKEYAGLTTTTIACKQRLRLSAAGIDLIKWGLESTFGGI
EELPNEVKAKRELVNVKSENGGDTKMEEADEELPHGDDVVAAYLVMGCITVRYRASGEVE
LEWEGNMLNDGIADSVMAVLLGIESSPAAVKRSASKNPHSHSLPPKNPHAHLSPTDRLDR
LLMFLEAQFGADHVSPIADPKLPTPSEQDQNQKAITASAKSSPKSDADASMDVSEDEAET
ETETKAEKELNARKEKELQRLHKMGIPVPGVQIKLDEKMEAKVWLENLEVESANKIFRER
VRAVVERAVEVVAPLWG
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaagcggaaggcgtcggccatggcgaccgagccagaggagcccgtcgaccca
gccgatgagctcatgttcctcaatcttggaggcggcaacgaagttggccgatcatgtcac
atcattcagtacaaggggaaaactgtcatgcttgatgctggtcaacatccagcatatgat
ggcctagcagccctgccattctttgatgactttgatctcagcacagtggatgttctttta
atcagccatttccatatcgaccatgccgcctcattaccatatgtcttggccaagaccaac
ttccgaggccgtgtcttcatgacacatgccaccaaggccatctacaaatggcttatccaa
gacagtgtccgtgtcggcaacacatcgtcaaacccaacatcatcgctcgtctacaccgag
gaggaccatctcaagacctttccaatgatcgaggccatcgactacaacactacccacacc
atctcctcgatccgcatcacaccatacccagccggccacgtccttggcgccgccatgttc
ctgatcgaaatcgccggtctcaagatcttcttcaccggcgactactcccgcgaagaagac
agacatcttatctctgccgaagtacccaagggcgtcaagatcgacgtcctcattaccgag
tccacctacggcatcgcctcgcacatcccgcgcgtagagcgtgaacaggctctcatgaag
tccatcaccggcattctcaaccgcggcggccgcgtcctcatgcccgtcttcgccctcggt
cgcgcccaggagctcctcctcatcctcgacgaatactggggcaagcacgccgaattccag
aaataccccatctactacgcctccaacctggcccgcaagtgtatgctggtataccagacc
tacgtcggctccatgaacgataacatcaagcgtctgttccgcgagcgtctagccgagtcc
gagtcctccggcgacggcgccggcaagggcggaccgtgggacttcaaattcatccgctcg
ctcaagagcatcgaccgctttgaggatgtcggcggctgcgtcatgctcgcctcccctggt
atgcttcaaaacggcgtcagccgcgagctgctggagcggtgggcgccgagcgagaagaac
ggcgtcatcatcaccggttactcggtcgaggggaccatggccaagcatatcatgcaagag
ccggacacgatccaggccgtcatgtcgcgcaacattgccggcgcccgtcgtggcccaggt
ggtggtggtgatgccgagaaggtcatgatcccgcgccgctgcactgtccaagaattctcc
ttcgccgctcacgttgacggtgtcgaaaacagggagttcattgaggaagtcgccgccccc
gtcgtcattcttgttcacggcgaagtgcataacatgatgcgcctgaaatctaagcttctt
tcgctcaacgcaaacaaggaacacaaagtcaaggtgttcagtcccaagaactgtgaggag
ctgcgcatccctttcaagacagacaaagtcgccaaagtggtgggcaagttggcggccatc
ccaccggcacttaaagaggcgaagaacagccatgatggtccgctcccttcctccgaacct
caactcatcaccggtgttttggtccagaacgacttcaagatgtccctgatggctcccgag
gatctgaaagaatacgccggtctgacaaccaccactattgcctgcaagcagcgtctacgc
ttgagtgccgcgggcatcgatctgattaagtggggtctcgaaagcactttcggcggtatt
gaagaacttcccaacgaagtcaaggcgaagcgcgagctcgttaacgttaagagcgaaaac
ggcggcgataccaagatggaggaagctgatgaggagctgcctcacggtgatgatgtagtg
gctgcttacctcgtcatgggctgcattactgttcgttaccgtgctagcggcgaggtggag
ctggagtgggagggcaatatgcttaatgatggcattgctgactctgtgatggctgtgttg
ctgggtattgagagtagtcctgctgctgtgaagcgctcggcctccaaaaacccccactcc
cactccctcccccccaaaaaccctcacgcccacctctcccccaccgaccgtctcgaccgt
ctcctcatgttcctcgaagcccaattcggcgccgaccacgtctcccccatcgccgatccc
aagctcccaacaccatccgaacaagatcaaaatcagaaggcaatcaccgcatctgctaaa
tcgtcgcccaaatcagacgcagacgcctcaatggatgtctcggaagacgaagccgaaacc
gaaaccgagaccaaagccgaaaaagaactcaacgcgcgcaaggagaaggagttgcaacgc
ctgcataaaatgggtattcccgtgcccggagtgcagatcaagttggatgagaagatggag
gcgaaggtgtggttggagaatttggaggtggagagcgcgaataagatctttagggagagg
gtgagggctgtggtggagcgggcggtggaggttgttgcgcctctttgggggtga
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