Sordaria macrospora: 10801956
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Entry
10801956 CDS
T01610
Symbol
SMAC4_07222
Name
(RefSeq) uncharacterized protein
KO
K13091
RNA-binding protein 23/39
Organism
smp
Sordaria macrospora
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smp03041
]
10801956 (SMAC4_07222)
Spliceosome [BR:
smp03041
]
Common components
Common spliceosomal components
General mRNP proteins
10801956 (SMAC4_07222)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_10
RRM_occluded
RRM_3
RRM_7
PHM7_cyt
RRM_5
Motif
Other DBs
NCBI-GeneID:
10801956
NCBI-ProteinID:
XP_065947081
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All DBs
Position
5:complement(join(684714..684972,685030..685503,685568..685876,685947..686626))
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AA seq
573 aa
AA seq
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MSGLDVEALLDSTASNKEQMDIDPPTTNGDADQNGSKSERRDRDTDRDKERDGRDRGDRD
RGRDTSRDRARRHRDRSSGRLRNSSSEAGRDTPRSEAGSHRSRRRSRSRESGRHSRRHRD
GDYYRGRGGRSRSRSPNRYYRPRGDDRRGGDSYRRRDDDRRSGRNTPRVRDGTPPPLTED
ERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKSEEHVQ
AALQLTGQKLLGIPVIVQLTEAEKNRQVRTTESTGHHPNSIPFHRLYVGNIHFSITEQDL
QNVFEPFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGFDLAGRPIRVGLGN
DKFTPESTANLLQRFQGQNHHQQFQGSAFSGAGGRGPATSNFDRAGARDNEKGTGASALD
DTDVAGVNFNNYSRDALMRKLARTDEPPASVVPDRQILKPKTETKPLPVNVNMASRCVVL
HNMFDPAEEEGEDWIKELEDDVREEAEAKYGHVVHISLDPNSAGDIYLKFDKVQGGENAI
KGLNGRYFGGRMITAAPVVDAVYSSLFSRSKAI
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcctagacgtcgaggcactcctcgattccactgcctccaacaaggagcagatg
gacattgaccctcctaccaccaacggcgacgccgaccagaacggctccaaatcagaacgc
cgtgaccgtgacacggaccgcgacaaagagcgcgacgggcgagaccgtggtgatcgtgat
cggggcagagataccagcagggaccgggccaggagacatcgcgaccgcagttcgggccgc
cttcgcaattcgtcgagtgaagctggtagagataccccccgcagtgaggccggaagccac
cgaagtaggcgtcggagccggagccgtgaatctggccgacactcacgccgtcacagagac
ggagattactaccgaggccgcggaggccgctcccgatctcgctccccaaaccgctactac
cggccccggggcgatgatcgccgtggcggtgacagctaccgccgacgtgacgacgaccgc
cgcagcggcagaaacaccccccgggtcagagatggcacccctccgcccctgaccgaggac
gagcgtgatcgccgcaccgtgttcgtccagcagttggccgcccgtctgcgcactcgcgag
cttaaggagttttttgagaaggtcggccctgttgccgaggcccagattgtgaaggacagg
gtcagcaatcgctccaagggcgttggttatgttgaattcaagagcgaagaacacgtccaa
gccgctctccagctcactggccagaaactcctaggtattcctgtcatcgtccagcttacc
gaggctgagaaaaaccgccaagtgcgcaccacggagtccactggacaccaccccaactcg
attcctttccaccgtctttacgtgggcaacatccattttagtattacggagcaagatttg
cagaatgtttttgagccctttggcgaactcgagtttgtccagctccagaaggacgacaac
ggcaggagccgtggttacggatttgtacagttccgtgacgctggtcaggccagagaggcc
ctcgaaaagatgaatgggttcgacctcgctggtcgcccgattcgtgttggacttggaaac
gataagtttaccccagagtccactgccaatctcctgcagaggttccaaggacagaatcat
catcaacaattccagggatctgctttctcgggcgccggtggacgtggccccgctacttcc
aactttgatcgcgctggcgcacgcgacaacgagaagggcaccggtgccagtgctctcgac
gacaccgacgttgccggtgtcaactttaacaactatagtcgcgatgctctcatgaggaag
ctggcacgaactgacgagccacctgctagcgttgttcctgaccgacagattctcaagccc
aagacggagaccaagccgctgcctgtcaacgtgaacatggccagtcgatgcgttgttctt
cacaacatgtttgaccctgctgaggaagagggtgaagactggatcaaggagctcgaggac
gatgtccgcgaagaggccgaggccaagtatggccacgtcgttcacatttctctagatccc
aactcggccggcgacatctacctcaagttcgacaaggtccagggaggagagaacgccatc
aagggcttgaacggccggtatttcggtggaagaatgattaccgctgcgcctgttgtggac
gcggtctacagcagtttgttctctcgctcaaaggcgatttaa
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