Sordaria macrospora: 10802187
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Entry
10802187 CDS
T01610
Symbol
SMAC4_06156
Name
(RefSeq) uncharacterized protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
smp
Sordaria macrospora
Pathway
smp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
10802187 (SMAC4_06156)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smp03019
]
10802187 (SMAC4_06156)
Messenger RNA biogenesis [BR:
smp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
10802187 (SMAC4_06156)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
HBS1_N
GTP_EFTU_D3
GTP-eEF1A_C
MMR_HSR1
GTP_EFTU_D2
Roc
Ras
Motif
Other DBs
NCBI-GeneID:
10802187
NCBI-ProteinID:
XP_065947772
LinkDB
All DBs
Position
7:complement(join(2330045..2331444,2331489..2332133,2332314..2332620))
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AA seq
783 aa
AA seq
DB search
MSRHQAVRNLDYEAELEDEYGYSDEEEELSPEDQVRMTEGTAQVLEALGVEAPKVTKAQI
EESLYYYFFDVDKTIAYLISKYIDPPKKPAKAAPPKAAPKHDAAIASASRESFAHLFRDL
PWGNIPPERQAVLIPPPQLPGGLLGGSGAPPKMSKLQQLAAARKKKAEEQKSTSEDVEQT
QVKMTELTVHDNQASKENRPLAGLFGKRVKTSETTAQGRIPLTMAEPTRPEIPQAQVPEV
TPSLQQEHVQPEPEPVVAPPKAEPSAFASTLFGPSSDSLKRKPREVFSLPYMAISLYTPE
AFGKPSPDDVVLAAQAKVATAGKKSANVQSNKKGPSSADGVTNQVGQLKIDDTPLPKSRN
LNVLSEFEKTKGKKTASFVVVGHVDAGKSTMMGRLLLDLNVVDQRTVDKLRKEAEKIGKT
SFALAWVLDQRHEERSRGVTIDIATNRFETDTTSFTILDAPGHRDFIPNMIAGASQADFA
ILVIDASTGAFESGLKGQTREHSLLIRSMGVSRIIVAVNKLDTVNWSQERFDEIRHQVAG
FLTGTGFQPKNIAFVPVSGLHGDNLVRKTTDPAASWYTGNTLVEELEASEPSARALTKPL
RMTISEVMRTPQSPISITGRIDAGSLQMGDALLVQPSGEKAYVKSLQVDDGEPADWAVAG
QNVILHLSNIDAIHVRVGDIVCDPAKPIQCVDTFTLKALAFDILMPMQVDVHRGRLHAAG
KIEAIDAILDKVTGKVIKKKPMIVKPGTVSRVRVTLHTKVPLEAGQRVVLRSGGQTVAAG
LLE
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgccatcaagcggtccgaaaccttgactacgaggcagaactcgaggacgagtat
ggctactccgacgaggaagaggagctcagccctgaagaccaagtccgcatgacggaaggc
acagctcaggtactggaagcactgggagttgaggcacccaaggtcacaaaggcgcagata
gaggagtcactttattactacttcttcgacgttgacaagactatcgcctacctcatttcc
aagtacatcgacccgcccaagaagcctgccaaggctgctcctccaaaggcagcgccaaag
cacgatgcggccattgcaagtgcttctcgagagtcatttgcccacctgttccgggattta
ccatggggaaatattccacccgagcggcaggcggttctcataccgcctccacaacttcct
ggaggtctacttggagggtcaggagcgcccccaaagatgtccaagctgcagcagctagca
gccgcccggaagaagaaagccgaagagcagaagagcacctctgaagatgttgagcagaca
caagtcaagatgacggagctcactgtccacgacaaccaagcatccaaggagaatcgtccg
ctcgctggcttgtttggcaagcgagttaaaacatcagagacaactgctcaaggtcgcatt
cctctcactatggcggagcccacaagacccgaaattcctcaagctcaagtgcccgaggtt
actccaagtctgcagcaggagcatgtccaacccgagccggaaccggtggtggcaccgcca
aaagccgaaccgtctgcttttgcttcgactctcttcggcccctcatcggatagtctcaag
cgcaaaccccgcgaggtgttcagcttaccatacatggcgatctccttgtacaccccggaa
gcctttggcaaacccagcccagatgacgtggtccttgcggctcaggcgaaagtcgccaca
gccggaaagaagtctgcgaacgtccagtcgaacaaaaaggggccatcgtccgcggatggc
gtaacgaaccaagtcggccagctcaagatagacgacacgcctttgccaaagagtcgcaat
ctcaatgtgctctcagaattcgagaagacgaagggcaagaagactgccagctttgtagtt
gttggccacgttgacgccggcaagagcaccatgatggggcgactgttactcgacctcaac
gttgtcgaccagcgcaccgttgataaactacgaaaagaggcggagaagatcggcaaaaca
tcctttgctctcgcctgggtgttggatcaacgccacgaggagcgcagccgaggcgtcacc
atcgacattgctaccaaccgctttgagacagacacgacatctttcacaattcttgatgct
cctggccatagggactttatccccaacatgatcgctggcgcaagtcaggcagactttgct
atcctggtcatcgatgcaagcacgggagcatttgaatctggtcttaagggccaaactaga
gaacattctcttcttatccgcagcatgggcgtttcgagaattatcgtggccgtcaacaag
ctcgacacggtcaactggtcccaggagagattcgatgagattaggcaccaggtggcggga
ttcttgacgggcactggattccagcccaagaacatcgcgtttgtacccgtatcaggcctc
cacggcgataaccttgtccgaaaaaccacagatccagcagcgtcctggtatacgggaaac
acactggtggaggagctcgaggcttcggaaccaagtgccagggcattgaccaagcctcta
cggatgaccatctcggaggtcatgcgcacgcctcagagtcccatatcgatcacaggccgc
atcgacgcaggttcactgcaaatgggcgatgcgctcctggtgcagccgagcggcgagaag
gcctacgtcaagtccctccaggtcgacgacggagaaccagcggactgggccgttgccgga
caaaacgtgatccttcatctcagcaacatcgacgccatccacgtacgagtcggagacatc
gtatgcgaccctgccaagccgattcaatgcgtggacacgttcacgctcaaggccctagcg
ttcgacatcctcatgcccatgcaggtggacgtgcacaggggacgactccatgcggcgggc
aagatcgaggctatcgatgccatcttggacaaagtgacaggcaaggtgatcaagaagaag
ccaatgatcgtgaagccgggaaccgtttccagggttagggtcacactgcacacgaaggta
ccactcgaggcgggacagagggtggtgctgaggagtggtggacaaacggtggcagctggg
ttgttggagtga
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