Sordaria macrospora: 10802214
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Entry
10802214 CDS
T01610
Symbol
SMAC4_06183
Name
(RefSeq) uncharacterized protein
KO
K03679
exosome complex component RRP4
Organism
smp
Sordaria macrospora
Pathway
smp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
10802214 (SMAC4_06183)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smp03019
]
10802214 (SMAC4_06183)
Messenger RNA biogenesis [BR:
smp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
10802214 (SMAC4_06183)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
10802214 (SMAC4_06183)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
RRP40_S1
DUF6496
Motif
Other DBs
NCBI-GeneID:
10802214
NCBI-ProteinID:
XP_003344897
UniProt:
F7W6A2
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All DBs
Position
7:2226272..2227429
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AA seq
385 aa
AA seq
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MPITILPPKAFRDQPPSRSLNHDSDDVMSDATSDSEEDSDTQPGGVSLDGGATIHPRKRR
SAAAASSTFTKRPKTNVTSSSVPRSAIVTPGERITTDPQWMRGHGTYLSSASLGEQAITS
SLAGIVTRTNKLLSVRPLRARYTPEVGDLVVGRIVEVQAKRWRVDVGSTQLAALPLSAIN
LPGGILRKRTETDELQIRTFFAEGDLVVAEVQQLFQDGGAVLHTRSLKYGKLRNGVFMAV
SGTGGGGGVVRSRRQVWTLESANNGGPIDIILGVNGYVWISKHVEPVVPEEAKGQTGITN
IEEVVSATMYSSQNDRIEPETMREIARIRGVVTALVENGLRVDEDMVTKGYNEAVELALV
SAEGPEDVYLGGERGEQLAAALTAV
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcacaatcctcccacccaaggccttccgggaccaaccacccagccgttccctc
aaccatgactccgacgacgtaatgtccgacgccacctccgactctgaagaagactccgac
acccaaccaggcggcgtctcactcgacggcggcgcgaccatccaccctcgcaagcgccgt
tccgctgccgcagcttcgtcaaccttcaccaagcgtcccaagaccaacgtcaccagtagt
tcggtccctcgctccgccatcgtcacccccggcgagcgcatcaccacggatcctcaatgg
atgcgcggccacggcacttacctctcctccgcctccctaggtgaacaagccatcacctcc
tctctggcgggcatcgtcacgcgcaccaacaagctcttgtccgtgcgccccttgcgcgcc
cgctacacgcccgaggtgggcgacctcgtcgtcggccgcatcgtggaagtgcaggctaag
cggtggcgtgtggacgtcgggtctacacaactcgctgcgttgcctttgtccgccattaac
ctgccgggtggtatcctccgcaagcgcaccgagacggacgagctgcagatccgcacgttc
ttcgccgagggcgacctagtcgtggccgaggtgcagcagcttttccaggacggcggcgcg
gtgctgcacacgcgctcgctcaagtacggcaagttgcggaatggggtgttcatggctgtt
tccggtaccggtggcggcggcggtgtggtgaggagccgcagacaggtgtggactttggag
agcgcgaataatggcggcccgattgatatcattttgggcgtgaacgggtatgtctggatc
tcgaagcatgtggagcccgtggtgcctgaggaggcgaaggggcagacgggtattacgaat
atcgaggaggtggttagtgcgaccatgtattcgagccagaatgacaggatcgagcccgag
acgatgagggagattgcgaggatcaggggagtggtgacggcgctggtggagaatgggctc
agggtcgatgaggatatggtcaccaaggggtataatgaggcggtggagttggcgctggtg
agtgctgagggcccggaggatgtgtatctcggtggtgagaggggtgagcagcttgctgct
gctttgacggctgtttag
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