KEGG   Sordaria macrospora: 10802214
Entry
10802214          CDS       T01610                                 
Symbol
SMAC4_06183
Name
(RefSeq) uncharacterized protein
  KO
K03679  exosome complex component RRP4
Organism
smp  Sordaria macrospora
Pathway
smp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:smp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    10802214 (SMAC4_06183)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smp03019]
    10802214 (SMAC4_06183)
Messenger RNA biogenesis [BR:smp03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     10802214 (SMAC4_06183)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     10802214 (SMAC4_06183)
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 RRP40_S1 DUF6496
Other DBs
NCBI-GeneID: 10802214
NCBI-ProteinID: XP_003344897
UniProt: F7W6A2
LinkDB
Position
7:2226272..2227429
AA seq 385 aa
MPITILPPKAFRDQPPSRSLNHDSDDVMSDATSDSEEDSDTQPGGVSLDGGATIHPRKRR
SAAAASSTFTKRPKTNVTSSSVPRSAIVTPGERITTDPQWMRGHGTYLSSASLGEQAITS
SLAGIVTRTNKLLSVRPLRARYTPEVGDLVVGRIVEVQAKRWRVDVGSTQLAALPLSAIN
LPGGILRKRTETDELQIRTFFAEGDLVVAEVQQLFQDGGAVLHTRSLKYGKLRNGVFMAV
SGTGGGGGVVRSRRQVWTLESANNGGPIDIILGVNGYVWISKHVEPVVPEEAKGQTGITN
IEEVVSATMYSSQNDRIEPETMREIARIRGVVTALVENGLRVDEDMVTKGYNEAVELALV
SAEGPEDVYLGGERGEQLAAALTAV
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgcccatcacaatcctcccacccaaggccttccgggaccaaccacccagccgttccctc
aaccatgactccgacgacgtaatgtccgacgccacctccgactctgaagaagactccgac
acccaaccaggcggcgtctcactcgacggcggcgcgaccatccaccctcgcaagcgccgt
tccgctgccgcagcttcgtcaaccttcaccaagcgtcccaagaccaacgtcaccagtagt
tcggtccctcgctccgccatcgtcacccccggcgagcgcatcaccacggatcctcaatgg
atgcgcggccacggcacttacctctcctccgcctccctaggtgaacaagccatcacctcc
tctctggcgggcatcgtcacgcgcaccaacaagctcttgtccgtgcgccccttgcgcgcc
cgctacacgcccgaggtgggcgacctcgtcgtcggccgcatcgtggaagtgcaggctaag
cggtggcgtgtggacgtcgggtctacacaactcgctgcgttgcctttgtccgccattaac
ctgccgggtggtatcctccgcaagcgcaccgagacggacgagctgcagatccgcacgttc
ttcgccgagggcgacctagtcgtggccgaggtgcagcagcttttccaggacggcggcgcg
gtgctgcacacgcgctcgctcaagtacggcaagttgcggaatggggtgttcatggctgtt
tccggtaccggtggcggcggcggtgtggtgaggagccgcagacaggtgtggactttggag
agcgcgaataatggcggcccgattgatatcattttgggcgtgaacgggtatgtctggatc
tcgaagcatgtggagcccgtggtgcctgaggaggcgaaggggcagacgggtattacgaat
atcgaggaggtggttagtgcgaccatgtattcgagccagaatgacaggatcgagcccgag
acgatgagggagattgcgaggatcaggggagtggtgacggcgctggtggagaatgggctc
agggtcgatgaggatatggtcaccaaggggtataatgaggcggtggagttggcgctggtg
agtgctgagggcccggaggatgtgtatctcggtggtgagaggggtgagcagcttgctgct
gctttgacggctgtttag

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