Sordaria macrospora: 10802273
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Entry
10802273 CDS
T01610
Symbol
SMAC4_06726
Name
(RefSeq) uncharacterized protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
smp
Sordaria macrospora
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smp03041
]
10802273 (SMAC4_06726)
Enzymes [BR:
smp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
10802273 (SMAC4_06726)
Spliceosome [BR:
smp03041
]
Complex C
Other components
Complex C specific factors
10802273 (SMAC4_06726)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
DEAD
AAA_29
AAA_16
AAA_30
AAA_23
AAA_19
FtsK_SpoIIIE
Cas3-like_C_2
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
10802273
NCBI-ProteinID:
XP_003344949
UniProt:
F7VPU6
LinkDB
All DBs
Position
5:join(3581573..3581797,3581871..3583670)
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AA seq
674 aa
AA seq
DB search
MPADLGLDAGFIPALHKPSALLPIAKHREALLYTVETHPVTIVVGQTGSGKSTQIPQFLE
KAGWCADGKVIAITQPRRVAATTVAIRVAEEYGCELGKEVGFSIRFEDVTSEATRIKFLT
DGLLIREALVDPLLSRYSVIMIDEAHERSISSDILLGLLKKIRKKRPELRIIISSATLQA
EEFLRFFSDSTDEAKSADNVKSDEKQDAPVGAIISLEGRTYPIDILYTEKPVEDYLEKAI
STVFDIHANEPKGDILVFLTGRDEIEKAVEAVSERSAQLPAGSEAILPLPLYAGLPTEKQ
MYVFDQTPDNFRKVIFSTNIAEASVTIDGIVYVIDSGFVKLRAYNPQTGIETLTATPVSK
ASAAQRAGRAGRTKAGKCFRLYTEEAYQALPDANPPEIQRSNLAPFVLQLKALGIDNVLR
FDFLTPPPAELMTRALELLYSLGALDDYAKLTKPLGLRMAELAVEPMMAKTLLSAPSFGC
LGEMLTIAAMTSLGGSIWVQPDGGKEEAESARRKFAADEGDHLTHLNVYQAFVTKGRKEA
RFCHDNLINFKAMTRTMSIRAQLRRWLERFGITEDGSSVAQAGAGVNKAEQIQRCLTTGY
FAHAARMQPDGSFRNVSGTAVLHAHPSSLMFNRKADWVIFHEIMESGEKTFIRDITKIEK
NWLVEYAPAFYSTM
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgatcttggacttgacgcgggattcattcctgccttgcacaagccatctgcg
cttttgcccatcgccaaacatcgtgaggctctgctgtacacggtcgaaacccatcctgtc
accatcgttgttggtcagaccggttctggaaaaagtacgcaaatcccccagttccttgag
aaagcaggatggtgtgctgatgggaaggtcattgcaatcactcagcctcgccgtgtcgct
gcaaccacggttgccattagagtcgccgaagaatatggctgtgaacttggaaaggaagtc
ggcttctccatccgcttcgaggatgtcacatctgaagcaacccgcatcaagttcctcact
gacggtcttctgattagagaggcgctcgttgaccccttgctttctcgctactccgtcatc
atgatcgatgaagcccatgaacgatccatcagctccgacatcttgcttggcttgctcaag
aagattcgcaagaagcgccccgaactgaggatcattatcagcagtgcaactctgcaagcc
gaggaatttctcaggttcttctctgatagcactgacgaggccaagtccgctgacaatgtc
aagtctgacgagaagcaggatgccccagtcggcgccatcattagcctggaaggtcgaaca
taccccattgatatcctctacaccgagaagcccgtcgaggactatcttgagaaggccatc
tcgactgtcttcgacatccacgccaacgaacccaagggcgacattctcgttttcttgacc
ggcagggacgagatcgaaaaggccgtcgaagctgtctccgagcgctcggcccagttgccc
gcaggatccgaagccatcttgcctttgccactttatgctggcctcccgactgagaagcag
atgtacgtgtttgaccaaactcccgacaatttcagaaaggtcatattttcgaccaacatc
gccgaagcctccgtgaccattgatggcatcgtctatgtcatcgattccggctttgtcaaa
ctgcgggcatacaacccccagaccggcatagaaacactgactgcaacacccgtttccaaa
gcctctgccgcacagcgcgctgggcgagcgggcagaacgaaagctggaaaatgtttccgt
ctctatactgaggaagcgtaccaggccctccctgatgccaaccctcccgagatccaacgc
tcaaatttggcgcctttcgttcttcagctcaaggcactcggcattgacaatgtcttgcgc
tttgatttcctcactccaccccctgctgagctcatgacgcgtgctttggagctgctgtac
tctctgggtgctttggatgattacgccaaactcaccaagccgctgggtctgaggatggct
gagctggccgttgaaccaatgatggccaagaccctcctttccgccccttctttcggttgc
cttggcgagatgttgacaattgcagccatgaccagcctgggcggttccatctgggtccag
cccgacggcggaaaggaagaagcagagagtgccaggcgcaagtttgctgctgatgaaggt
gaccacctcacgcatttgaacgtctaccaggcattcgttaccaagggacgcaaggaggcc
cggttttgtcatgacaacctcatcaacttcaaggctatgacgcgtaccatgagtatccgc
gcgcagctgagaaggtggcttgaacgctttgggatcaccgaggatggctcgtcagtcgct
caggcaggagctggagttaacaaggcggagcagatccaacgatgcctgacaacgggttac
tttgcccatgctgcacgtatgcagccggacggatccttccgaaacgtgtcaggcacggcg
gtgctgcacgcccatcccagctcgctcatgttcaaccgtaaggctgactgggtcatcttc
cacgagatcatggagtccggggagaagacgtttatcagggacatcaccaagatcgagaag
aactggctggtcgaatatgcgcctgccttttacagtacgatgtga
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