Sordaria macrospora: 10802908
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Entry
10802908 CDS
T01610
Symbol
SMAC4_06213
Name
(RefSeq) uncharacterized protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
smp
Sordaria macrospora
Pathway
smp03020
RNA polymerase
smp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
10802908 (SMAC4_06213)
09124 Replication and repair
03420 Nucleotide excision repair
10802908 (SMAC4_06213)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smp03021
]
10802908 (SMAC4_06213)
03400 DNA repair and recombination proteins [BR:
smp03400
]
10802908 (SMAC4_06213)
Transcription machinery [BR:
smp03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
10802908 (SMAC4_06213)
DNA repair and recombination proteins [BR:
smp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
10802908 (SMAC4_06213)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
10802908
NCBI-ProteinID:
XP_065947207
LinkDB
All DBs
Position
5:join(2507241..2507306,2507380..2507945,2508020..2508401)
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AA seq
337 aa
AA seq
DB search
MDYDPMVMDDAESLGPVVKISQADSTRVKFELSNTELCFANSLRRVMLAEIPTIAIDLVE
IEANSSVLADEFIAHRLGLIPLNAEGIDQLLYSRDCDCDEYCEHCSVTLNLHAKCTGDDI
MQVCARDLVPVGDRVNQVLGSPIINDPEGQGPLILKLRHGQEIKLQCIAKKGIAKEHSKW
APSAAIGFEYDPHNKLHHLDLWYEQDPKKEWPPSEYADWEEPPQEGEPFDYDAVPQRFYF
NVETAGPISPDGIVTEGIKVIQQKLAGLIHELTETDGGENGYNGPRSPGYNEGGDNWNDQ
GSFTPYGNGGNQSSWGGQGGATPYGTTPYGGGGNSWS
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggattacgatccgatggtgatggatgacgccgagtccttgggaccggtcgtcaagatc
tcacaagcggacagcacccgagtcaagttcgagctctctaacaccgagctttgcttcgcc
aactcccttcgtcgcgtcatgcttgccgaaattcccacgattgccatcgatctagtcgag
atcgaggccaacagctccgtcctggctgacgagttcattgcccaccgcctgggccttatc
ccactcaacgccgaaggaatcgaccaacttctctattctcgagactgcgactgcgacgag
tactgtgaacattgcagtgtgaccctcaaccttcacgccaagtgcactggcgacgacatc
atgcaagtctgtgctcgcgatcttgttcccgttggcgatcgcgtcaaccaagttctcggc
tcgcctatcatcaacgatcccgaagggcagggtccccttatcctcaagctccgtcacggc
caggagatcaagctccagtgcattgccaagaagggtatcgcaaaggagcattccaagtgg
gctccaagtgccgccatcggcttcgagtacgatcctcacaacaagctgcaccacctcgac
ttgtggtacgagcaggatcccaagaaggagtggcctccttcggagtacgccgactgggaa
gagcctccccaggagggcgagcctttcgactacgatgccgtgccacaacgcttttacttt
aacgtcgagaccgccggtcccatctctcccgacggtattgtcaccgaaggcatcaaggtc
atccagcagaagctggctggactgatccacgaacttaccgaaaccgatggtggtgagaac
ggatacaacggaccgcgcagcccaggctataacgagggtggcgacaactggaacgaccaa
ggatcgttcacgccatacggaaacggaggaaaccagagctcttggggaggtcagggcggt
gcaacgccctacggaacgactccttatggaggcggcggaaattcttggtcttga
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