Sordaria macrospora: 10802911
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Entry
10802911 CDS
T01610
Symbol
SMAC4_06216
Name
(RefSeq) uncharacterized protein
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
smp
Sordaria macrospora
Pathway
smp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
10802911 (SMAC4_06216)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smp03041
]
10802911 (SMAC4_06216)
04121 Ubiquitin system [BR:
smp04121
]
10802911 (SMAC4_06216)
Spliceosome [BR:
smp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
10802911 (SMAC4_06216)
Ubiquitin system [BR:
smp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
10802911 (SMAC4_06216)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
Motif
Other DBs
NCBI-GeneID:
10802911
NCBI-ProteinID:
XP_003345563
UniProt:
F7VP40
LinkDB
All DBs
Position
5:complement(join(2491530..2492674,2492732..2493545))
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AA seq
652 aa
AA seq
DB search
MDAASIEELNKVRRAMGMKPLPVPGEAPKARSPTPDGEDKGSTLETREAASYDNYKKALE
ADAAKKKREERAAAIKKAREMAQRNAVLDGKGIADDVEDDELDAKAWLKNQKKRQKKIDA
AKKAEEEKAAAEAAAAAAEHTARDLAGVKVAHDMDTFLESGDQVLTLRDTGVLDAEEEGD
ELENIELREREKLNERLDLKKKKPLYDPNDIDETGERTILSQYDEEISGKKKKAFTLGQT
IRTTRTTDSLADILDSAPVQRKGQTIDLDMLDDAPAPVSDYMDASEIKVKKPKKKKTKST
RRRDDDDVLYPGETETPETDQQMDIDSGATYTKKRKTFDEDFVDDDDLQQSLARQRSAAL
KKRKTRPEELAKQLREQSNQPEPDVAEGGGIVIDEISEFVDALHAERGEEKKAPKPKPQQ
KSETAVTAMDEESSDEEMEDADKERQSERVTSPSAELPTTGVEEEKLVAQGMAATFALLK
DRCLIDAESRGSELVKNFRESAHFKAELARLMKKFDDETRIQRERDRASGRLDRMSIRER
EEWQRQQNTIREQHQARVMEQLFRETYKPTVELKYVDADGRSLDQKEAFKELSHQFHGKG
SGKGKTDKRLKKLEAERRRMEQSMLDASQNVGMSTAASHQGKKRKEAGVRLA
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgcgtcaatcgaagagctcaacaaggtgcgacgggcaatgggcatgaagccc
ctgcccgtccccggcgaagcacccaaggctagatcacctactcccgacggcgaagacaag
ggcagcaccctcgagacccgcgaagccgcatcgtacgacaactacaagaaggccctggaa
gcagatgccgcgaagaagaagcgcgaggagagagccgccgccatcaagaaggcccgcgag
atggcccagcgcaacgccgttctcgatggcaagggcatcgccgacgacgtggaagacgac
gagctcgatgccaaggcctggctcaagaatcagaagaagcgacaaaagaagattgacgcc
gccaagaaggccgaggaggagaaggccgccgcagaagctgctgccgcggcggcggagcac
acggctagggatctggctggtgtcaaggttgcgcacgatatggatacctttctcgagagt
ggcgatcaggtcctcacgctcagagacactggcgtgttggatgctgaagaggaaggagac
gagctcgaaaacattgagctccgggaacgggaaaagctgaacgagagactcgacctcaag
aagaagaagccgctttatgatcccaacgacattgacgagacgggcgaacgaacgatcctg
tcacaatacgatgaggagattagtggcaagaagaagaaggcttttacactcggtcagaca
atcaggacaacgagaacgacagactctttggccgatatcctagacagtgcgcctgttcag
aggaaggggcagactattgatttggatatgctcgacgatgctcccgcgccagtatccgat
tacatggatgcgtccgaaatcaaagtcaagaagccgaaaaagaagaagaccaagtcgacg
aggcgacgagatgacgacgatgtgctatacccaggagagaccgaaaccccagagacagat
caacagatggacattgactctggtgcgacctacacgaaaaagaggaaaacgtttgacgag
gactttgtcgacgatgacgacctgcaacaatctttggcccgccagagatcggcagcattg
aagaagcgaaagacacgacccgaagagcttgctaaacaactgcgcgaacaatcgaaccaa
ccagagccggacgttgctgagggtggcggtattgtcatcgacgaaatcagcgagttcgtc
gatgctctccacgccgagcgtggagaagagaagaaggccccaaagccaaaaccgcaacaa
aagtcagagacagcggttacggcaatggatgaggaatcatcagacgaggagatggaagac
gccgacaaggaaagacagtccgagcgggtcacatcgccgtccgccgagcttcccacaacc
ggtgtcgaagaggagaagctcgtggcccaaggcatggccgcaaccttcgccttgctcaag
gaccgctgcctcatcgacgccgagtcccgcggctccgagctggtcaagaacttccgcgaa
agcgctcacttcaaggccgagctcgcccgtctcatgaagaagtttgatgacgagacccgc
atccagcgcgagcgcgaccgtgccagtggccgtcttgaccggatgtcgatccgcgagcgt
gaggagtggcagcgccaacagaacacgatccgtgaacagcatcaggcacgcgtcatggag
cagttgttcagggaaacgtacaagcccacggtcgagctcaagtatgtggacgctgatggt
cggtcgctcgatcagaaggaggccttcaaggaactttcgcaccagttccacggaaaggga
agtggaaagggcaagacggataagcggctcaagaagcttgaggcggagaggagacgaatg
gagcagagtatgcttgacgccagccagaacgtcggtatgagcacggcggcgtcgcaccag
ggtaagaagcgaaaggaggctggtgttcggttggcgtaa
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integrated database retrieval system
