KEGG   Sordaria macrospora: 10803068
Entry
10803068          CDS       T01610                                 
Symbol
SMAC4_05867
Name
(RefSeq) uncharacterized protein
  KO
K12816  pre-mRNA-processing factor 17
Organism
smp  Sordaria macrospora
Pathway
smp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:smp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    10803068 (SMAC4_05867)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:smp03041]
    10803068 (SMAC4_05867)
Spliceosome [BR:smp03041]
 Complex C
  Other components
   Step II factors
    10803068 (SMAC4_05867)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_VPS8 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_Vps41
Other DBs
NCBI-GeneID: 10803068
NCBI-ProteinID: XP_003345710
UniProt: F7W3C7
LinkDB
Position
6:join(553207..554456,554516..554894)
AA seq 542 aa
MADFNEYPANLSVKDALIVRQVAEPDHAIVPYTGEDLSRPRLGPANPFRDETDPTSTAVG
VKRKNVLTGTAAETYISEHTFRAKHRAIERGGGPAREALGSTAKKAAAAKLRQQREGRGS
ATVADGDGAYVGPWARYKKQEYEEVNEEELGSDEEFEIVEEEEEDEEEVVESGTVVKAPT
KNLARRKEVEELGEETTTFHGTEEFDYLGRTYMHVPQDLDISLTKDVGSVTNFIPKKHMH
TWRHHAGKPVTALQLFPKSSHLGLSGSTDGTIKIFDVYRNRELLRTYAGHSKAITDLSFN
RDGTKFLSGAFDRWIKLWDTETGQCVNRFNTGKTPHVIKFNPSVDQGHEFLAGLSDNRIV
QYDSRAGEEPVQEYDHHLGAINTLEFVDESRRFMSTSDDRSLRVWEYGIPVEIKTISEPD
MFALTKSTQHPSGKYVLYQCSDNSIVAYSSASDKFRQNRKKSWRGHNTAGSGIGLVCSPD
GQFVASGDTAGYVCFWDWKTCKMYHKIHADTSGGAINCVVWSQQETSKVFTAGAKGEIRM
WD
NT seq 1629 nt   +upstreamnt  +downstreamnt
atggccgacttcaacgaatacccagccaacctctcagtcaaagacgccctcatcgtccgc
caagtcgccgaaccagaccatgccatcgtcccctacaccggcgaggatctaagccgaccg
cgcctcgggcccgccaaccccttccgcgacgaaaccgacccgacctccaccgccgtcggt
gtaaagaggaagaacgtcctgaccggcaccgcggccgagacctacatcagcgaacacacc
ttccgcgccaagcaccgcgccattgagcgcggcggcggtcccgcgcgcgaagcactaggc
agcacggccaagaaggcagcggctgcgaagctcaggcaacagagagaagggagaggaagc
gcgacggttgcggatggcgatggcgcttacgtcgggccgtgggcgcggtacaaaaagcag
gagtatgaggaggtgaatgaggaggagctggggagcgatgaggaatttgaaattgtcgaa
gaagaagaggaggacgaggaagaggtggtagaaagcgggacggtagtcaaggcgccgacg
aagaacttggccaggaggaaagaggtcgaagagttgggcgaggagacgacgacgttccac
ggcacggaagagttcgattacctcggtcggacgtacatgcacgttccgcaggatctggat
atcagtctcaccaaggacgtcgggagcgtcacgaactttatccccaagaagcacatgcat
acctggcgacaccacgccggcaagccggtcacggcgctgcagttgtttcccaagtcgagt
cacttgggcttatcgggcagcacggacggcaccatcaagatcttcgatgtgtatcgcaat
cgcgagctgttgcggacgtacgcggggcattcgaaggccatcacggacttgtcgtttaat
agggacggcacaaagttcttgtcgggcgcgttcgacaggtggatcaagctctgggatacg
gagacgggccagtgtgtcaaccgattcaacacgggcaagacgccgcatgtcatcaagttc
aacccgtcggttgatcagggccacgagttcttggcgggcttgtcggataacaggatcgtg
cagtacgatagtcgcgccggggaggagccggtgcaggagtacgatcaccacttgggcgcc
atcaacacgctcgagtttgtggatgaaagcagaaggttcatgtcgacgtcggatgatcgc
tcgttgagggtgtgggagtatggaattccggttgagatcaagactatcagcgaacccgac
atgttcgccctcaccaaatccactcaacacccctcgggcaaatacgtcctctaccaatgc
tccgacaactctatcgtcgcctactcttcggcttccgacaaattccgccagaaccgcaag
aagtcctggcggggccacaacaccgccggctccggcatcgggctcgtctgcagtcccgac
ggccagttcgtcgcttcgggagataccgccggatatgtctgcttctgggactggaagacg
tgcaagatgtaccacaagatccatgccgataccagcggcggagcgatcaactgtgtggtt
tggtcgcagcaggagacgagtaaggtgtttacggcgggggcgaagggtgagattaggatg
tgggattag

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