Sordaria macrospora: 10803121
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Entry
10803121 CDS
T01610
Symbol
SMAC4_05921
Name
(RefSeq) uncharacterized protein
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
smp
Sordaria macrospora
Pathway
smp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
10803121 (SMAC4_05921)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smp03019
]
10803121 (SMAC4_05921)
Messenger RNA biogenesis [BR:
smp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
10803121 (SMAC4_05921)
U7-dependent histone pre-mRNA processing factors
10803121 (SMAC4_05921)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
10803121
NCBI-ProteinID:
XP_003345764
UniProt:
F7W3I1
LinkDB
All DBs
Position
6:complement(721210..724221)
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AA seq
1003 aa
AA seq
DB search
MFSFCPLQGALSDSSASQSLLELDGGVKILIDVGWDETFDVEKLRELGRIAPTLSLILLT
HATVPHLAAYAHCCKHFPPFQRIPVYATRPVIDLGRTLTQDLYASTPLAATTISSASLAE
VSYASGYSQAASAENTFLLQPPTPEEITKYFSLIQPLKYSQPHQPLPSPFSPPLNGLTIT
AYNSGHTLGGTIWHIQHGLESIVYAVDWNHSRENVFAGAAWLSGNHGGAGSTQVIEQLHK
PTALVCSSRTPDASLSRLKRDEQLMESIKLCIARGGTVLIPVDSSARVLELSYLLEHAWR
KEVAKDNDVFKSAKLFLAGRTISSTMKNARSMLEWMDDNIIKEFEAFADESRRNNRRDEG
NHQTGPGPFDFKYLRLLERKAQIEKILKQSEDTEPRAKVILASDASLDWGFSKDILKSIA
ADARNLVILTEKPNFEPNHKPSIARTLWEWWKERRDGVATERTSNGDTFEQVYAGNRELE
VETAERKGLEGDELNVYQQWLATQRQLQATLQSGGTTTLEAPGDVLDDADTDTDTDSEGS
DTEQQGKALNIATTMAQASRKKVALKDEDLGVTILIKKENTYDFNVRGKKGRDRMFPVAM
RRRRADEFGELIRPEDYLRAEEREDAENAEAGQANNNTQELEGLGKKRKWEDVGTAGRGR
GGLGPNKRPHHNDRRRLSAGEADAAPFSENGPAGDDLSDLEDEEDDTLNGPAKLVVTKET
IPVHLRIAFVDFSGLHDKRSLTMLIPLIQPRKLVLVAGGKDETLALAADVKKLLIAQSTG
TESAIEVLTPAVGTTVDASVDTNAWVLKLADPLVKGLKWQNVRGLGIVTVTGLLLPGGEF
QPTSTEDADSAKRPKLEDGSAPSEPSTALVKTGTNTLPTTTASLPTLDLVPPTLASSLSV
RSQAAQPLHVGELRLADLRRAMLSAGHKVEFKGEGTLLIDDVVVVRKSTAQGGRVELESV
GLPSDTMPGTTSGGLLNAAMKVGGTFYAVRKKIYEGLAVVAGA
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcttctgccctctccagggtgccctctccgactcgtcggcttcgcagtcgctg
ctggagctcgacggcggcgtcaagatcctgatcgatgtcggctgggacgagacctttgat
gtcgaaaagcttagggagctcggcagaatagcgccaactctctcgctcattcttctcacc
cacgcgaccgtcccccatctagccgcctacgcgcactgctgcaagcacttcccacccttc
cagcgcattcccgtgtatgcgacgcgccccgtcatcgatctcggccgtaccctgacacag
gacctctatgcctcgacacccctagccgcgacgaccatctcatcagcctcgctcgccgaa
gtatcgtacgcctcaggctactcccaggccgcctcggcagagaacaccttcctcctccag
ccacccactcccgaggagatcacaaaatacttctctctaatccagcctttaaagtattct
cagccacatcagccgctaccgtcgcccttctccccgcctctcaacggcctcacgattacc
gcatacaactcgggccacacactaggaggaacgatttggcacattcagcatgggttggag
tcgattgtctacgccgttgattggaaccattcccgcgagaatgtctttgcgggagcggct
tggctaagtggcaatcatggcggtgccggaagtacacaggttattgagcagttgcacaag
ccaacagctctagtatgcagcagtcgtaccccggatgcctctctgtcgcgtctcaagcgt
gacgaacaactgatggaatcgatcaagctttgcattgccagaggtggtaccgtccttatc
cccgttgattcgagcgccagggtgttggagctgtcttatcttctcgagcacgcctggaga
aaagaggtcgccaaggacaatgatgtcttcaagtcggccaaactgttccttgccggacgc
actatcagcagtaccatgaagaatgccaggagtatgttggagtggatggacgacaacatt
atcaaagagtttgaagcttttgcggacgaatcgaggaggaacaacaggagagatgagggt
aatcaccagaccggaccaggaccattcgacttcaaatacttgaggctactggagcgcaag
gcacagattgagaagattttgaaacagtcggaggataccgaaccaagagccaaggttatt
ctcgccagcgacgcgagcctggactggggtttctccaaggatattctcaaatctattgcc
gctgatgcgcgtaacttggtcattctaacggagaagcccaacttcgagccgaaccacaaa
ccatcgattgcgaggacactatgggagtggtggaaagagagaagggacggggtggcgaca
gaacgtaccagcaacggcgacacattcgaacaggtctatgctggtaaccgcgagttggag
gtagaaactgctgaacgaaaggggcttgagggtgatgagctaaacgtctatcaacaatgg
ctagcaacacaacggcagctacaggccactctacaaagcggtggcaccaccacattagaa
gcaccaggagacgtgttggatgacgctgataccgacaccgacaccgattcagaaggctcc
gacacagagcaacaaggaaaggctcttaatattgcaaccaccatggctcaagcaagccgc
aaaaaggtggccctcaaggacgaggacctcggtgtcaccatcctcatcaagaaggagaac
acatacgacttcaatgtccgcggcaagaagggccgagaccgcatgttccccgtcgccatg
cgtaggaggcgtgccgacgaatttggcgaactgatccggcccgaagactaccttcgcgcc
gaagaacgcgaagacgccgagaacgcagaagccggccaagcaaacaacaacacccaagag
ctcgaaggtctcggcaagaagcgcaagtgggaagacgttggaacagccggcaggggccga
ggcggtttggggcccaacaagcggccccaccacaacgaccgccgtcgcctctccgcaggc
gaagccgacgccgctcccttttccgagaacggcccagcaggcgacgacctctccgatctc
gaagacgaagaagacgacaccctcaacggccccgccaagctggtggtcaccaaggagacc
atccccgtccacctgcgcatcgcctttgttgacttcagcggcctccacgacaagcgcagt
ttgaccatgcttatcccgctcatccagccgcgcaagctggtccttgtcgccggcggcaaa
gacgagaccttggccctggccgcagacgtcaagaagctgctcattgcccaatccaccggt
accgagtccgccatcgaggtgctcacacccgcggtgggcacaacagtcgacgcctcggtc
gacaccaacgcctgggtcctgaaactagccgatccgctggtcaagggtctcaaatggcag
aacgtgcgcggtctaggaatcgtcaccgtcacgggcctgttgcttccaggaggcgagttc
cagcctacctctaccgaagacgccgacagtgcaaaacgtccaaaactcgaagacggttcc
gccccctctgagccgtctacagccttagtaaaaacaggcaccaacacactaccaaccacc
accgcctctcttcccacgctagacctcgtcccgccaaccttagcctcttcgttatccgtc
cgctcccaagccgcacaacccctccacgtaggcgagctccgcctagctgacttgcgtcgt
gcaatgttgagcgcaggccacaaggtggagttcaagggcgaaggtacgctgttgatcgac
gatgtggttgttgtgcgcaaatcgacagcgcagggcggcagggtggaactggagagcgtg
gggttgccgagtgatacgatgcctgggacgacgagtggtgggttgttgaatgcggctatg
aaagtgggtgggacgttttatgcggttaggaagaagatttatgaggggctggctgttgtt
gctggtgcttga
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