Sordaria macrospora: 10804114
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Entry
10804114 CDS
T01610
Symbol
SMAC4_04159
Name
(RefSeq) uncharacterized protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
smp
Sordaria macrospora
Pathway
smp03022
Basal transcription factors
smp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
10804114 (SMAC4_04159)
09124 Replication and repair
03420 Nucleotide excision repair
10804114 (SMAC4_04159)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smp03021
]
10804114 (SMAC4_04159)
03400 DNA repair and recombination proteins [BR:
smp03400
]
10804114 (SMAC4_04159)
Transcription machinery [BR:
smp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
10804114 (SMAC4_04159)
DNA repair and recombination proteins [BR:
smp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
10804114 (SMAC4_04159)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
OmpA
XAC1
Clathrin_lg_ch
Motif
Other DBs
NCBI-GeneID:
10804114
NCBI-ProteinID:
XP_003346727
UniProt:
F7VZI2
LinkDB
All DBs
Position
5:complement(1668457..1670427)
Genome browser
AA seq
656 aa
AA seq
DB search
MAPIEIPRGRASFKKREGIITLSEDKTALIWSPLPGTGPPVISLSVSNIINLQQTPKTNP
KVVLRVVEKPKAPGADPAAYPFQFTHGTEARNEADAIKDILSQIIAELRGDDPSLPKPAK
AGPNGAGASAAMAMASAVNSKHLPFRWFEDDMLKADVELQQSLMKKDKALAQIYNDAKSS
KPDSLSDTSFNNQFWATRITLLRAYAIELNQKKGSYNVLSTIKPRTENGELKLNINHEQV
QLIFQQHPLVKRIYNENVPKLTESEFWSRFFLSRLSKKLRGERITDNDNTDPLFDKYLEA
DNTMAVPAKITATSVPPIINIEANEENQGGFRSGNLKDVEMRPRANIPIIRTLNSLSEKI
MANVAPSDVDPSAPSYSKNGIADALSQQLALQDLRGDAEAQLIRLSVKDTSTFFTGNQPS
LTDQEAADARLYAAQVPSDVLFEVQADMDTLHSDSRGGIDLHRSIGVDPDSEDESTSLDS
KNPKPQHVGSRASLRFAQTQILDGMKSARSHLTSHGSHTTNASEERPMSLPTDIAHRATL
TCATTAEFLKQFWTVFNSTSTTLDPEKAQELAYLADSLTRSKQRIEALAEEAEKRRQEIM
EKRKREIREYYQKTGRKARWVPVGGGRDAVWAVFEGMVKGLERAVGVWEMVSSGRL
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggccccgattgagattccccggggacgggcctctttcaagaagagagagggcatcatc
acattgtccgaagacaagacagccctgatatggagtcccttaccgggcactggcccgccc
gtcatctcactttccgtatccaacatcataaacctccaacagactcccaagactaatccc
aaggtcgtcttaagggtcgtcgagaagcccaaggcccctggcgccgatccggctgcctac
cccttccagttcacacacggcaccgaagccaggaatgaggccgatgctatcaaagatatt
ctctctcagatcattgctgagcttcgtggtgacgacccttcgctacccaagccggcaaag
gctggccctaacggcgccggcgcctctgccgccatggccatggccagtgccgtgaactcg
aagcatttgccgttccgctggttcgaagacgacatgctaaaggccgatgtagaacttcag
cagtctctcatgaagaaggataaggcgttggctcagatatacaacgacgcaaagtcgtcc
aaaccagactcgttatcggatacctccttcaacaatcagttctgggccacccgcatcacc
ctgctacgtgcatatgccatcgagttgaaccagaagaagggctcatataacgtcttatca
acaatcaagccacgaaccgagaatggcgagctcaagttgaacatcaaccatgagcaagtt
cagctcatcttccaacagcatcctctcgtcaagcggatctacaacgagaacgtccccaag
ctcacagaatctgagttctggtcccgcttcttcctcagtcgcctatccaagaagctccgg
ggcgagcgcatcacggacaacgacaacaccgaccccttattcgacaagtatctcgaagcc
gacaacaccatggccgtgcccgccaagatcaccgctaccagcgtgccacccatcatcaac
atcgaagccaacgaggagaaccagggcgggttccggtcaggcaacctcaaagacgtcgag
atgcgcccgcgcgccaacatccccatcatccgaaccctcaactcgctctccgaaaagatc
atggccaacgtcgcgccctccgacgtcgacccttcggcaccctcctactccaaaaacggc
atcgccgacgctttatcccagcaactcgccctgcaggacctccgcggcgacgccgaggcg
cagctcatccggctttccgtcaaggacacatccactttcttcaccggcaaccaaccctcg
ctcacagaccaagaagccgccgacgcgcgcctctacgccgcccaagtgccctcggacgtg
ctcttcgaagtgcaagcagacatggacactctccactccgacagccggggcggtatagat
ctgcaccgatccattggcgtcgacccggactccgaggacgaaagcacctccttggattcg
aagaatccaaaaccgcaacacgtcggctcccgcgcctcgctgcgcttcgcccagacgcaa
atcttagatggcatgaaatctgcccgctctcacctcacttctcacggatcccacaccaca
aacgcgtcagaagaacggcccatgtcgttacccaccgacatcgcgcatcgcgcgacactt
acctgcgctaccacagctgaattcctcaagcaattctggactgttttcaacagcacctcc
accaccttggacccagagaaagcacaagaactagcctacctggccgactctctcacccgc
tccaagcaacgcatcgaggctttagcagaagaagcggagaagcggagacaggaaatcatg
gagaagaggaagagggagattagagagtattatcagaagacggggaggaaggcgaggtgg
gtccctgtgggaggagggagggatgcggtgtgggcggtttttgagggcatggtgaagggg
ttggagagggcggtgggggtttgggagatggttagttcgggaagattgtag
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integrated database retrieval system
