Sordaria macrospora: 10804593
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Entry
10804593 CDS
T01610
Symbol
SMAC4_05480
Name
(RefSeq) uncharacterized protein
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
smp
Sordaria macrospora
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smp03021
]
10804593 (SMAC4_05480)
Enzymes [BR:
smp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
10804593 (SMAC4_05480)
5.6.2.5 RNA 5'-3' helicase
10804593 (SMAC4_05480)
Transcription machinery [BR:
smp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
10804593 (SMAC4_05480)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEN1_N
AAA_11
AAA_12
SEN1_barrel
AAA_19
AAA_30
UvrD-helicase
Viral_helicase1
DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
10804593
NCBI-ProteinID:
XP_003347180
UniProt:
F7VT21
LinkDB
All DBs
Position
1:join(1679487..1679869,1679937..1685499,1685578..1686069)
Genome browser
AA seq
2145 aa
AA seq
DB search
MADKMEYPELGTTDVQMAMMEMHQAFEEFPPEAHPICPLLSEADDTNYAVPNLPDANGTT
VAEKQKGIAAGLERCRITYGLSLLLVMPEAGKWINEWKERVNSFLTRCDGCARTWHKTRQ
QFLRAIEQYISHDNADLLRNLQRNLESFDEERITCGLKRAKFLLERDGPMPTTKLVKIEL
APCLALFESLCCMAYLNNKTNLDLFNYVFENVQPKKPLKMVGGAIPTMTYFLFEEYPVHR
AFAEAQWQRMPAEGLTDEEWEWAVRSGLKSHILGHRGIPPPARLCRFWSGFLLILRSMSE
KSILENLRGMEVQPNVYFLALENLGTNNVLALSMILKGLRTLMERSPKAFWDAYDQVTPS
TIVEEIFKSPAFKPLLSQSLDPDLMVEDRDNNGQQIPALAEWVRAFIRSLPSARRSDVCE
TLLRHLFETLRVDHNATQEAKATCVLAGLVTLRECLDGYLNLPSFDTGTSLIMVNQLLNR
VIQYKEVIIGATQLKAGDKFNVGLSQAAIAIVQSALALDAKATFMEWDAFVKGKPVQDAV
NRDSGALWESFLDLIFTGQTDLAKAMLRATMPLRSIERFIPKRKGQLKTEHAKFNSRFQQ
QTEAIGKMLGRLSIFNPADLDSFCSDPQSNTIQPIVATLIHGEDAIREAGFELVKAITGE
ITPSEAVSKMLEEYFTQFLEAFAGAVNHITSARDSNNPWSHMQHLLKCCEFVLDGLSDPS
VGQLRRKTLTPAEHAVVKGWWECEWRAVGHSFGSMRLWHEKVDKKVMEDFCRDVMELAEH
LLTQDGLMASALSSPQSISATNGDDGSEGMKLVLEPPRMHSYPLVDMLQLRDKYLIAGII
EITKKLIKRLQDNGMSLPPKTVAYLNNMLKKRKYTDGRFDYPTKTNLTNEQRIELLKALG
DDAAIEEQFVGGKPVNVKQEVKPVMKQAKLDFSKASLKDHMVSLTPAFEKATERRKNALL
ETMKAEAPLKAPPKVDSKAADKIKEARRLEREAKAKRDAEAIARAKALRAPPKLVQGEGS
GLAGVAGVRGKDHAPVLKDEIMVGSSSEDEDESDDDELVNLHAAGKKSMTEAERRAHRLL
AEKIRGPVKKVKIERSAKDMRARLIPPMDVLHQAILEWDIFHEGNDPPNGYRCDHVSDTY
HDPVSYKQTFFPLLINEAWRSFVTSKDETTSKPFGIKVLSRMTVDKFMEVTASVPAAVSK
DRQLSEGDIVIISKGQNPLQEPEELHCLSRIWKTTYKKDNVEVVYRLNAKGNQILPVLLP
GSEFQVVKITNMTTIEREYAALESLQYYDLMDEVLRAEPSPMLSFGDENIRNTMKNWELN
PGQAKAILNAKENDGFTLIQGPPGTGKTKTIVAMVGCLLTGVLKNPTAGVAIGRPGLGAA
KNAPSKKLLVCAPSNAAVDELVLRLKNGVKTQNGTTHKIEVVRLGRSDAINAGVRDVTLD
ELVKAKMDAQLNKDEGPTDREKMHQEAGEIKQKIAELRPQLEAARTMDDRQLINKYQREF
DELKRRQAHIGARIDADKASGNTFARETEIKRRQVQQEILDKAQVLCATLSGSGHEMFKN
LNVEFETVIIDEAAQCVELSALIPLKYGCSKCILVGDPKQLPPTVLSQSAARYGYDQSLF
VRMQKSHEKDVHLLDTQYRMHPEISSFPREAFYEGLLQDGDGMAKSRLQPWHRSALLGPY
RFFDVRGLQERGPKNQSLVNEEELKVAMQLYRRFKADYGDVDLKGKIGIITPYKAQLHRL
RSQFAQRFGDAITDEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTR
ARSSLWILGDSRALMQGEFWAKLIEDSKKRDRYTTGNIMGMLSQTGPRLSEAAFRALAIT
SSDDSRDGTPSGIKRELVEVKAEVKDEDGDVKMNDRSSFRGSSPPAPPSVSGSSAMGSSR
PPSRPPSGANTPAHIKNEFGSSPAPPPQPHREGLPLIQETTFTPRAKKRPHEGGGGDQPG
KKQHVDPIVSRAPKGPRGYNPNANNHGDLPPRPPPPAPSDPSAMEVLGLAPPTRAPAAQQ
YNNYQHQQPQYPPRGPQQGPPPPYPGRQQHQQQQQQQQQQQQQQQQQQQQQPPTGPSRPG
GPPTGPSRPGGGGGGGGYGQQQQQRPPPVVKKKAPVDPFIKRKKR
NT seq
6438 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaagatggaatacccggagctaggcaccacggacgtccagatggctatgatg
gagatgcaccaagccttcgaggagttccccccagaagcacatccgatctgtcctttgctt
agtgaagctgacgatacgaattacgccgtcccaaacctccccgatgcgaacggaacaacg
gtggcggaaaagcaaaagggaattgctgccgggctcgaacgatgtagaatcacctacggc
ctttcgctcctgttagtaatgccagaggcgggaaaatggatcaatgagtggaaagaacgt
gtcaactccttccttacaagatgcgacggatgtgccaggacatggcataagacacgccag
cagttcctccgagccattgaacagtatatttcccacgacaacgccgacttactgcgcaac
ctgcagagaaacctcgaatctttcgacgaggaacgcataacgtgcggcctcaagagagct
aaattccttctcgagagggatggtcccatgccgacaacgaagctcgtgaagatcgaactt
gcgccgtgtctcgccttgttcgaatcgctctgctgcatggcctacctcaataacaaaacg
aatctggacttattcaattacgtgttcgaaaatgtccagcctaagaagccgcttaagatg
gtgggaggcgctattccgaccatgacatatttccttttcgaagagtatccggtccacagg
gcgtttgcagaggcgcaatggcaacggatgccagcggaaggcctcaccgatgaggaatgg
gaatgggctgtcagaagtggtctcaagtcccatatcttgggccataggggcatcccgccc
ccggcgaggctgtgtcgcttttggagtggcttccttctcattttgcgatccatgagtgaa
aagagcattttggagaacctccgtggcatggaagtacaaccgaacgtttactttcttgct
ctcgaaaacttgggcaccaacaacgtccttgccctgagcatgatactgaaagggcttcgt
acgctcatggagcgttcgccaaaggccttctgggatgcttatgaccaagtcacacccagc
acgattgtggaggaaatcttcaagagcccggctttcaagcccctgctgagccagtccctc
gaccctgacttgatggttgaggaccgggataacaacggccaacaaattccagcgctggcg
gaatgggtcagggccttcatccgttccctcccatcagcgcggcggtcagacgtctgcgaa
actcttcttcgtcatcttttcgagactctccgtgtcgaccacaacgcgacccaggaagca
aaggccacttgtgtccttgctggtctggtgaccttgagagaatgcttggacggttacctc
aatcttccatcctttgatacagggacgtcccttattatggtcaaccagttactcaacaga
gttattcagtacaaggaagtcatcatcggtgccacgcaactcaaagccggggacaagttc
aacgttggcctctcacaggctgctatagctatcgttcagtctgccctggccttggacgcg
aaggcgacattcatggaatgggacgctttcgttaaggggaagcctgttcaagatgctgta
aacagggactctggcgcattatgggagtcgttcctggatctcatcttcaccggccaaaca
gaccttgctaaggccatgttgagagcaacgatgcctctcaggagtatcgaacggttcatc
cctaagcggaaaggccagctcaagaccgagcatgccaagttcaacagccgctttcaacag
caaacggaggcaattggcaaaatgctcggccgtctgtcaatatttaacccggctgatctc
gacagtttctgctcggatccgcaaagtaacactatccagcccattgtggcgactctgata
cacggtgaggatgccattcgcgaagccggcttcgagttggtcaaagccattacaggtgag
attacgccatctgaggccgtgagtaagatgcttgaggagtacttcactcaattcctggag
gcttttgctggtgccgtaaaccatatcaccagcgccagagactccaataatccgtggagt
cacatgcaacacttgttgaaatgctgtgaattcgtgctcgatggcttaagtgatccgtcc
gtaggccagctcagacgcaagaccctgacccctgcggaacatgcggtcgttaagggatgg
tgggagtgcgaatggagagccgtcggccactcgttcggatccatgagactctggcacgag
aaggtggacaaaaaggtcatggaggacttttgtcgtgatgtgatggagcttgcagagcac
ctcctcacccaagatggtctcatggcctcggcacttagcagtccacaaagcatctcagca
acaaacggggacgacggctcagaaggcatgaaattggttctggagccgccgaggatgcac
tcatatcccttagtggacatgttgcaactccgcgataaataccttattgccggtatcatc
gagatcacaaagaagctgatcaagcgtctgcaagacaacggcatgtcgcttcccccaaaa
actgtcgcttatctcaacaacatgctaaagaagaggaagtacactgatggaagatttgat
taccccacaaagacgaatcttaccaatgagcaacggatcgagctgctaaaggcgctcggg
gatgatgccgccatcgaagagcaattcgtcggtggaaagcctgtcaatgtcaagcaagag
gtcaagccggtcatgaaacaagccaagctcgatttctcaaaggcctcactcaaagaccac
atggtttcgcttacgcctgcctttgagaaggccactgagaggcggaagaatgctctgttg
gagacgatgaaagccgaagctccactcaaagctcctcccaaagtcgattcaaaggctgcc
gacaagatcaaggaggccagacggctggagagagaagcaaaggccaagcgagatgctgag
gccattgcgagggcaaaggctctgcgtgcgccaccgaagctggtgcaaggagaaggctcg
ggtctagctggggttgctggagttcgtggaaaagatcacgccccagtgctcaaggacgag
atcatggttggatcatcttcagaagacgaggatgagtctgacgatgacgagctggtcaac
ctgcatgctgctggcaagaagagtatgactgaggccgagcgtcgcgcccatcggttgttg
gccgagaagatacgcgggccggtcaagaaggtcaagatcgagcggtccgccaaggatatg
cgcgctcgtcttattcctcctatggatgttttgcaccaggctatcttggagtgggacatc
ttccacgagggcaacgatccgccaaacgggtaccgttgcgatcacgtctcggatacctac
cacgacccagtcagctacaagcaaaccttcttcccgctactcatcaacgaagcctggcgc
tcatttgtcacgtcaaaggatgaaaccacttccaagcctttcggcatcaaggttctcagc
cgtatgacagttgacaagttcatggaagtcacggcgtcagttccagctgcggtcagcaag
gaccgtcaactgtctgaaggagatattgtcatcatctccaagggccaaaacccacttcaa
gagccagaagagctgcattgtctttcgcgtatttggaagacaacctacaagaaagacaac
gtggaggtcgtctaccgcctgaacgccaagggcaaccagatcttacctgtgctactgcct
ggctcggagtttcaagtcgttaagatcactaacatgacgaccattgaacgcgagtatgcc
gccctggaaagtttacagtactacgatctcatggacgaagtattgagagccgaaccgtcc
cccatgctgtcgtttggcgatgagaatatcaggaacaccatgaagaactgggaactcaac
ccaggtcaggcgaaggccatcctcaacgccaaagagaacgatgggtttacccttatccag
ggtcctccgggtactggtaaaacaaagaccattgtggccatggtcggctgtctgctgacc
ggagtgctcaaaaatcctaccgctggtgtggccattggccgtccaggactcggcgcggca
aagaatgctccatccaagaagctgcttgtttgcgcgcccagtaacgcagctgtggacgaa
ttggtgttgcgtctgaagaatggtgtcaagacacagaatggaacgactcacaaaatcgag
gtagtccgtctcggtcgcagtgatgccatcaacgcaggtgtcagggatgtcacgctcgat
gagctggtcaaggcaaaaatggatgctcagttgaacaaggacgaaggcccaactgaccga
gaaaagatgcaccaggaagctggcgagatcaagcagaagattgccgaactcagaccgcaa
ctggaagcggcgcgcacaatggatgaccggcagcttatcaacaagtatcagcgagagttc
gacgagctcaagcggcgccaagcgcacatcggcgcgcgcatcgatgcggataaagctagc
ggaaacacattcgctagagagactgagattaaacgccgccaggttcagcaggagattctc
gataaggctcaggtgctgtgcgccactctcagcggtagcggtcacgagatgttcaagaac
ttgaacgtggagtttgagacggtcatcatcgatgaggcggcgcagtgcgtggagcttagc
gcgctcattcccttgaagtacggatgctcaaagtgcattcttgtcggtgatcccaagcag
ttgccacctaccgttctctcccagtctgctgcgcggtatggctacgaccagagtctgttc
gtccgcatgcagaagagccacgagaaggacgtgcatctcctcgatacccagtatcgtatg
catcctgagatcagctccttccccagagaagccttctacgaaggtctcctacaagacggc
gatggcatggccaagtcgcgtctccagccctggcaccgcagtgctctgcttgggccgtat
cgcttcttcgatgttcgcggtttgcaggagcgtgggccaaagaaccagtcactcgtcaac
gaggaggaactcaaggtcgccatgcaactttatcgccggttcaaggccgattacggcgat
gtcgacctcaagggcaagattggtatcatcactccttacaaggcccagctgcaccgattg
cggtcgcagtttgcgcagcgctttggtgacgccatcacggatgaaatcgagttcaacacc
acagatgccttccagggccgagagtgcgagatcatcatcttctcttgcgttcgtgctagc
cctacgggcggtatcggtttcatgacggatatccgccgtatgaacgtcggtcttacacgt
gcgcggtcttcgctctggatcctcggcgactcccgtgccctcatgcagggcgagttttgg
gcgaagctcattgaagattcgaagaagcgtgatcggtataccacgggtaacatcatgggc
atgttgagccagacggggcctcggctgtctgaagcggctttccgggctttggcgattact
agctctgatgacagcagagacggtacgccgagcggtatcaagcgggagttggtcgaggtg
aaggccgaggtcaaggacgaggatggcgatgtgaaaatgaacgataggtcatcgttcagg
ggatcttctcctccggctcctccttctgtcagtgggagcagtgcgatgggctcgtctcga
cccccatctagacctccttcaggagcaaataccccggctcatatcaagaacgagttcgga
agttcgcctgcgccgccgccgcagccgcacagggaaggcttgccactcattcaggagacg
actttcacgccgagggcgaagaagaggccacatgagggaggagggggtgatcagcctggc
aagaagcaacacgtcgaccccatcgttagtcgagcccccaagggaccgagaggttacaac
cctaacgccaacaaccacggtgacctcccgccaagaccaccgcctcccgcgccgagtgac
ccttcggcaatggaagtcctcggcctggcacctcccaccagagcaccagctgctcaacag
tacaacaactatcagcatcagcagccacagtacccaccccgtggtcctcaacagggacct
ccgcctccgtaccccggccgtcaacagcatcaacaacaacaacaacaacaacaacaacaa
caacaacaacaacaacaacaacaacaacaacaaccgcctactggtccttcgagaccgggt
ggtcctccaactggtcctagcagacctggtggtggtggcggtggtggtggttatggtcag
cagcagcagcagagaccgccgccggtggtgaagaagaaggcccctgttgatccatttatt
aagcggaagaagaggtga
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integrated database retrieval system
