Sordaria macrospora: 10805134
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Entry
10805134 CDS
T01610
Symbol
SMAC4_03797
Name
(RefSeq) uncharacterized protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
smp
Sordaria macrospora
Pathway
smp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
10805134 (SMAC4_03797)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smp03019
]
10805134 (SMAC4_03797)
03041 Spliceosome [BR:
smp03041
]
10805134 (SMAC4_03797)
Messenger RNA biogenesis [BR:
smp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
10805134 (SMAC4_03797)
Spliceosome [BR:
smp03041
]
Complex B
Other components
Prp19-related factors
10805134 (SMAC4_03797)
Complex C
10805134 (SMAC4_03797)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
TPR_15
Mad3_BUB1_I
TPR_8
RPN7
NRDE-2
Motif
Other DBs
NCBI-GeneID:
10805134
NCBI-ProteinID:
XP_003347699
UniProt:
F7VZZ1
LinkDB
All DBs
Position
3:join(1487027..1487077,1487154..1487324,1487382..1489646)
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AA seq
828 aa
AA seq
DB search
MSILSRASDRRPDLSLVSEEDFPYEQDIVRNPGTAKPWLAYIEYKLQHGTVQEQAYIMER
ACMQLPRSYKLWKMYLRFRTKHVSKLNAAIFASEYQKVNSLFERALILLNKMPRIWEMYL
KFLMQQPLVTHTRRTFDRALRALPITQHNRIWALYRPFANSAEGETAVKIWRRYMQVHPE
DAEDFIELLVTVGLYTEAVHKYIEILNNPRFTSKNSKGHYELWSEMVDLLVEHATEVQTG
HETGIDVERIIRSGIERFADQRGKLWCGLATYWIRRGSFERARDVFEEGITTVMTVRDFT
LVFDSYTEFEESIISALMEMASTRAEKGEVDEVADFDLDIRMMRFEHLMDRRPFLLNDVL
LRQNPNNVTEWEKRVALWGDNKEEVVKTYLDAIEAIQPKKAVGALHQLWANYAKFYEAGG
DLSNARRIMEKAVKVNYKSVAELADMWIEWAEMELRNECFDEAMRVMAKAVQAPKRSTVD
YFDETLSPQQRVHKSWKLWSFYVDLVESVSSLDETRKVYERIFELRIATPQTVVNYANLL
EEHKYFEESFKIYERGLDLFSYPVAFELWNLYLTKAVDRKISIERLRDLFEQAVEDCPPK
FAKVIYLMYGNLEEERGLARHAMRIYERATRAVADEDRADMFNFYITKSASNFGLPSTRP
IYERAIAALPDAEARDMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTNPGFWEKWDQF
EVAHGNEDTYKEMLRIKRSVQAQYNTDVNFIASQALARSQQKRMDEEAAGNGGEMDTEVA
DAMAALERQARAPVGFVAASEGPKGGSMPVQLVQVHNPDAIDLDEMDE
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcctttcacgcgcctccgaccgtcgcccagacctctccttggtcagcgaggag
gactttccctacgaacaagacatcgtccgtaaccccggtaccgcgaagccatggcttgcc
tatatcgagtacaagcttcagcatgggacggtccaggagcaggcctatatcatggagcgc
gcctgtatgcagcttcctcgatcctataagctttggaagatgtatctccggtttaggacg
aaacacgtttcgaagctcaatgccgccatctttgcctccgagtaccaaaaggtcaacagc
ctcttcgagagggcactgatcctcctcaacaagatgcctaggatatgggagatgtatctc
aagtttctgatgcagcagccgctcgtgacacacacacgacgcaccttcgatcgggccctc
cgcgctctccccattacgcaacacaacaggatatgggctctgtaccgacccttcgcgaac
tcggccgaaggcgagacggctgtcaagatctggcgcaggtacatgcaggttcacccggag
gatgcggaggactttatcgaattgttggtcacggtgggactatacacggaagccgttcac
aagtacatcgagatcctcaacaacccgagattcacgagcaagaacagcaagggacactat
gaattgtggagcgagatggtggatttgctggtcgagcatgcgacggaagtgcagacggga
catgagacgggaatcgacgtcgaacggatcatccgcagtggcatcgaacgatttgccgac
cagaggggtaagctgtggtgcggcttggcgacctactggatccgacgaggcagcttcgag
cgcgcgcgagacgtttttgaggagggcattacgaccgtcatgaccgttcgggacttcacc
ctcgttttcgattcctacacggagtttgaggagtccatcattagcgctctgatggagatg
gcatcgacccgggctgagaagggagaggtggacgaggtggctgatttcgatttggatatc
cgaatgatgcggttcgaacatttgatggaccgccgacctttcctcttgaacgatgttctc
ctgaggcagaaccccaacaacgtcacagaatgggagaagcgtgtggccctgtggggcgac
aacaaggaggaggttgtcaaaacttaccttgatgctattgaagccattcaaccgaagaag
gcagtgggcgcgcttcaccagctgtgggctaattacgccaaattttacgaggccggaggg
gacctttcaaatgcccgaagaatcatggagaaggccgtcaaggtcaactacaagtccgtg
gcagagctagcagacatgtggatcgagtgggcagagatggagcttcggaatgagtgcttc
gacgaggccatgagggtcatggcaaaggcagtgcaggcgcccaagaggtctacggtggac
tacttcgacgaaacgctatcaccacaacaaagagttcacaagagctggaagctgtggagt
ttctacgtcgaccttgtggaaagcgtcagctcgctagacgagacccgcaaggtgtacgag
cggatattcgagcttcgcatcgccactccccagacagtagtcaactacgccaacctcctg
gaggagcacaagtacttcgaagagtcattcaagatctacgagcgtggcctcgatctcttc
agctaccccgtcgccttcgagctctggaacctgtaccttaccaaggccgtcgaccgcaag
atcagcatcgagcgcctccgcgatctcttcgagcaagccgtcgaggactgcccgcccaag
ttcgccaaggtgatctacctcatgtacggcaacctcgaagaggagcgcggcctcgcccgc
cacgccatgcgcatctacgagcgggccacgcgcgccgtcgccgacgaggaccgcgccgac
atgttcaacttctacatcaccaagtcggcctccaacttcggcctgccctcgacgcggccc
atctacgagcgcgccatcgccgccctgcccgacgccgaggcccgcgacatgtgcctcaag
ttcgccgacatggagaagcggctgggcgagatcgaccgcgcccgcgccatctacggccac
gcctcgcagttctgcgacccgcgcaccaaccccggcttctgggaaaagtgggaccagttc
gaggttgcgcacggcaacgaggatacctacaaggagatgctccgtatcaagagaagcgtg
caggcgcagtacaacacggacgtcaactttattgcctcccaagcgctggctaggagtcag
cagaagcggatggacgaggaggcagcaggaaacggtggagaaatggacaccgaggttgcg
gacgcaatggcggcgctggagagacaggcgcgcgcccccgtgggcttcgtagcggcttcg
gaaggacccaagggcggtagcatgccggttcagcttgttcaggttcataacccggatgct
atcgatcttgatgaaatggatgaatga
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