Sordaria macrospora: 10805297
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Entry
10805297 CDS
T01610
Symbol
SMAC4_06684
Name
(RefSeq) uncharacterized protein
KO
K10609
cullin 4
Organism
smp
Sordaria macrospora
Pathway
smp03420
Nucleotide excision repair
smp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
10805297 (SMAC4_06684)
09124 Replication and repair
03420 Nucleotide excision repair
10805297 (SMAC4_06684)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smp04121
]
10805297 (SMAC4_06684)
03400 DNA repair and recombination proteins [BR:
smp03400
]
10805297 (SMAC4_06684)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smp04147
]
10805297 (SMAC4_06684)
Ubiquitin system [BR:
smp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
10805297 (SMAC4_06684)
DNA repair and recombination proteins [BR:
smp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
10805297 (SMAC4_06684)
TCR (transcription coupled repair) factors
Cul4-CSA complex
10805297 (SMAC4_06684)
Exosome [BR:
smp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
10805297 (SMAC4_06684)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Ribosomal_S8e
Motif
Other DBs
NCBI-GeneID:
10805297
NCBI-ProteinID:
XP_003347851
UniProt:
F7VYB8
LinkDB
All DBs
Position
4:complement(join(941846..941903,942038..945249))
Genome browser
AA seq
1089 aa
AA seq
DB search
MPSNSTANPSELPRDNDNNKTINTSHIHHQHTPSSPPHATPTKRRFDDLDLNDRSVQTAA
SSSSNTNTAAYSAPPPPQEPNNKRSRSELFAASSATHPTTATTNTTTTATTMSAKLKGKR
PASGPPEVIDLTQGSSNSAGNSPVLTGGTSSSSHHNHGHGHGHGHGGGHPHIRGPPPISS
SSSHNNNKGHRTSSTAAPLNPKGSHGGNLNNRTPGAAGAGSGGGTNYLQTHIGARRLVVK
NLRPVATQTQTEEAHYARIRGDLDAALKAVFTGQGAGAGAGAGAGAGGAPAFGGHSPGPG
PGLGQGRSGVSSNTTTGGQPMEKLYRGVEDICRRGKKESAELYEWLKDRCKAWLNSDEVL
KSLLAASPSIATDRGEGGGEEDVILLKAVLAAWKRWIAQLLVIRWIFSYLDRSYLLPGGG
GTTAADGKGKSSATGKREGGPTSVNDMGISAFRSAMYSSRSRNGANMQTIGARVVNAVCV
LVMFDRLDDVRFDSQLLRESVAMLRLWGVYGKELEPKFINESRDYVRRFAEERSESCGLK
EYIDACERLLNRESERCDVYNFDSTTKRQLKDNAYQTLIFNYAEKLLDSGSVAKLLDAND
LDSMKALYELLKLSGIQKRLKGPWEQYIRKTGAAIVSDTARGDDMIIRLLQLRRALDVMI
RDAFHRDEDFTHGLRDAFGFFINDKSVSSSWNTGTSKVGEMIAKHIDMLLRGGLKTLPKA
LLSDVKDRQDAERSGIASTADEDAELDRQLDHSLELFRFIQGKDIFEAFYKKDLARRLLM
GRSASRDAERNMLAKLKNECGSSFTHNLEIMFKDQELAKDEIASYKTWLAGRGEDSPVAK
SDLDLSVNVLSAAAWPTYPDVRVLLPQNVLDHITAFDTYYKSKHTGRRLTWKHNLAHCVV
KARFDRGGPKELLVSAFQAIVLVLFNDAEERSPDDGGILSYDQLASATGMPDAELQRTLQ
SLACGKTRVLNKHPKGREVNKTDTFSVNRSFTDPKFRVKINQIQLKETKEENKETHERVA
QDRQFETQAAIVRIMKSRKQMAHSQLVAEVINQTKQRGAVDAVDIKANIEKLIEKDYIER
EGGNYVYLA
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgaatagcactgccaatccgtccgagttgcctcgtgacaacgacaacaacaag
actatcaacaccagccatatccatcaccaacatacgccatcatcccctcctcacgctacc
ccgacaaaacgccgtttcgacgacttggacctcaacgatagaagcgttcaaacagccgca
tcatcgtcatccaacaccaacacagctgcctactctgctcctcctcctccccaagaaccc
aacaacaagcgctcccgttcggaattattcgcagcttcttccgccacccacccgacaaca
gccaccaccaacaccaccaccaccgcaacaaccatgtccgccaagctcaagggaaaacgc
cccgcctccggcccgccagaggtaatcgacctcacccaaggaagtagcaactccgcgggg
aactcgcctgttcttaccggaggaacctcttcttcttctcatcacaatcacggtcacggt
cacggtcacggtcacggtggcggccatcctcacatcagggggccaccaccaatatcctcc
tcttcctcgcacaacaacaacaaaggccaccgtacgtcgtcaacagcggcgccgctcaac
cctaagggcagccatggcggcaacttgaacaacaggacaccgggggcggcaggggccggg
tccggtggcggcacgaattatcttcaaacacacattggcgcccgccgtcttgtggtcaag
aacctccgtcctgtcgctacccagactcagaccgaagaagcgcactatgcacgcattcgt
ggtgatttagatgcggcgctcaaggcggtgtttaccgggcagggtgcaggtgctggtgct
ggtgctggtgctggtgctggtggcgctcctgcttttggagggcatagtcctggtcctggg
ccaggtcttggtcagggtcgtagcggagtgagcagcaataccacgacgggcggtcaaccg
atggagaagctataccgcggggtggaagatatctgccggcggggtaagaaagagtcagca
gagctatacgaatggttaaaggatcgatgcaaggcgtggttgaacagcgacgaggtgctc
aagtcgctgttggctgcttctccgtctatagccacagacaggggagaaggagggggggag
gaggatgtgattctgctcaaggcggtgctggccgcttggaagaggtggattgcgcagctt
ctggtgatcaggtggatcttcagctacctggataggagttatctccttcctggtggcggc
gggactactgctgcagatgggaagggcaagagtagtgctaccggcaaaagggaggggggg
ccgacgagcgtgaatgatatgggtatcagtgcgttccggagcgccatgtatagctcgcgg
agcagaaacggcgcgaatatgcagacgattggcgcgcgggtggttaatgctgtgtgcgtg
ttggtcatgtttgatcggctggatgatgtccggttcgattcgcagctgttgagggagtcg
gtggccatgttgaggctctggggggtgtacggcaaggagctggagcccaagttcatcaat
gagtcgagagattacgtgaggaggttcgcggaagagcgcagcgagtcatgcggactcaag
gagtacattgatgcttgcgagcggctcctcaacagggaaagcgagcggtgcgatgtgtac
aactttgacagcacgaccaagcgccagcttaaggacaacgcgtaccagacactcatcttc
aactatgcggagaagcttctcgacagcggcagcgtcgcaaagttgctggacgcaaacgat
ctcgattccatgaaggccctatacgagctgcttaagttgtcaggtatccagaagaggctg
aagggaccgtgggaacagtacattaggaagacgggcgcggccattgtcagcgatacggct
aggggcgacgatatgatcattcgcttgctgcagctgcgccgcgcgctagacgtgatgatt
cgcgatgcgtttcacagggacgaggatttcacacatggtctacgcgacgctttcgggttc
ttcattaacgacaagtcggtgtcgtcatcgtggaacacgggcacctcgaaggttggcgag
atgattgccaagcatatcgacatgttgctccgcggcggtttgaagacgttgcccaaagca
ctgttgtccgatgtcaaggatagacaagatgcagagcggagcggtattgctagcacggcc
gatgaagatgccgagctggacagacagcttgatcacagcctggagctgttccgattcatc
cagggcaaagacatcttcgaggcgttctacaagaaggacctggcgcgcagactgctcatg
ggccgtagcgctagccgcgacgcagaaagaaacatgttggccaagctgaagaacgagtgc
ggttccagtttcacccataatctggagataatgttcaaggaccaggagttagccaaggat
gaaattgcctcctacaagacgtggctagccggcaggggcgaggactcgcccgtggccaag
tcggacctcgatctgagcgttaacgtcctctcggccgccgcgtggcccacctaccccgac
gtccgcgtcctgctgccgcagaacgtgctggatcacatcaccgccttcgacacgtactac
aaatccaagcacaccggccgccggctaacatggaagcacaacctcgcgcactgcgtcgtg
aaagcgcgcttcgaccgcggcggaccaaaggaacttctcgtctccgccttccaagccatc
gtcctcgtcctcttcaacgatgccgaggaaaggtctcccgacgacggcggtatcctctcc
tacgaccagctcgcctcggcaacgggcatgcccgacgccgagctccaacgcaccttgcag
tcgctagcctgcggcaagacgcgcgtgctcaacaaacaccccaaagggcgcgaggtcaac
aagacggatactttcagcgtcaacaggtccttcaccgaccccaagttccgcgtcaaaatc
aaccagatccagctgaaggagaccaaggaggaaaacaaggagacgcatgagagggttgcc
caggacagacagtttgagacgcaggcggccatcgtgcgcatcatgaagagccgcaagcag
atggcgcattcgcagcttgtggccgaggtcatcaatcagactaagcagaggggcgcggtg
gatgcggtggatattaaggctaatattgagaagcttattgaaaaggattatattgaaaga
gagggtggaaattatgtttatcttgcgtag
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integrated database retrieval system
