Sordaria macrospora: 10805658
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Entry
10805658 CDS
T01610
Symbol
SMAC4_04056
Name
(RefSeq) uncharacterized protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
smp
Sordaria macrospora
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smp03019
]
10805658 (SMAC4_04056)
03041 Spliceosome [BR:
smp03041
]
10805658 (SMAC4_04056)
03036 Chromosome and associated proteins [BR:
smp03036
]
10805658 (SMAC4_04056)
Enzymes [BR:
smp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
10805658 (SMAC4_04056)
Messenger RNA biogenesis [BR:
smp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
10805658 (SMAC4_04056)
mRNA cycle factors
Common to processing body (P body) and stress granule
10805658 (SMAC4_04056)
Spliceosome [BR:
smp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
10805658 (SMAC4_04056)
Chromosome and associated proteins [BR:
smp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
10805658 (SMAC4_04056)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Utp25_C
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
10805658
NCBI-ProteinID:
XP_065946093
LinkDB
All DBs
Position
2:complement(join(2590371..2592270,2592358..2592554))
Genome browser
AA seq
698 aa
AA seq
DB search
MADQLSSGMGNLSIDQPPSGPQMGGQGQMRRSYIPPHLRGKMGEAPPPMAGPPAAVNGLN
NSAWAGNNTYDARGPGGGNWPAPGGPGGPGGPPGPAFEGQQGAGWGGPRPQGGFNPNAYR
GNAGAGAGAGAGAGGGNFNRGSGDGQWRDGKHIPGPANPRVERELFGTPDDPSKQHTGIN
FEKYDDIPVEASGENVPEPVLTFTNPPLDNHLISNIALARYNVPTPVQKYSIPIVMGGRD
LMACAQTGSGKTGGFLFPILSQSFHTGPSPIPASAAGAYGRQRKAYPTSLILAPTRELVS
QIYDEARKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLCN
IKYLVLDEADRMLDMGFEPQIRRIVEGEDMPKVDQRQTLMFSATFPRDIQILARDFLKDY
IFLSVGRVGSTSENITQKVEYVEDVDKRSVLLDILHTHAGGLTLIFVETKRMADSLSDFL
INQNFPATSIHGDRTQRERERALEMFRNGRCPILVATAVAARGLDIPNVTHVINYDLPTD
IDDYVHRIGRTGRAGNTGIATAFFNRGNRGVVRELLELLKEANQEVPAFLETIARESSFG
GSGRGGRGGGRGGGRGRTQTADYRKFGGGGGGGGFGGGFGGAPASGGYGGGGYGGGAPPA
GGYSGGGGAGYGGGGGGGGGYGGGGYGNPGGAGGQSWW
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaactcagcagcggcatgggcaacctgtccatcgaccagcctccctcgggc
ccccagatgggcggtcagggccagatgaggcgctcttacattcctccccaccttcgcggt
aagatgggcgaggctcctcctcccatggccggccctcctgccgccgtcaacggccttaac
aacagcgcttgggctggtaacaacacctatgacgctcgtggcccaggtggtggcaactgg
cccgctcccggtggccccggtggccccggtggtccccccggccccgcctttgagggccag
cagggcgctggctggggcggtccccgtccccagggcggcttcaaccccaacgcgtaccgc
ggcaacgctggcgctggcgctggtgccggtgctggtgccggtggcggcaacttcaaccgt
ggctccggcgatggtcagtggcgcgatggcaagcacattcccggccctgccaatccccgt
gtcgagcgtgagctcttcggtacccccgacgacccgtccaagcagcacaccggtatcaac
ttcgagaagtacgatgacattcccgttgaggcttccggcgagaacgtgcccgagcccgtc
ctcaccttcaccaaccctcctctggacaaccacctcatttccaacatcgctctcgcccgc
tacaacgtccccactccggtccagaagtactccatccccattgtcatgggtggccgtgat
ttgatggcttgcgctcagactggttccggcaagactggtggtttcctcttccccattctc
tcccagtctttccacactggtccttctcccattcccgccagcgctgctggtgcttatggt
cgtcagcgcaaggcctaccccacttcgctcatccttgctcccacccgtgagttggtctct
cagatctacgacgaggctcgcaagttcgcctaccgttcgtgggtccgtccttgcgttgtc
tacggtggtgccgatatcggctctcagcttcgccagattgagcgcggctgcgatcttctt
gtcgctactcctggtcgtcttgtcgatctcatcgagcgtggccgtatctccctctgcaac
atcaagtaccttgtccttgatgaggctgatcgcatgcttgacatgggtttcgagccccaa
attcgccgcatcgttgagggtgaggacatgcccaaggtcgaccagcgccagactctcatg
ttctcggccactttcccccgcgacatccagatcctcgcccgcgatttcctcaaggactac
atcttcctgtccgtcggtcgtgtcggttccacctctgagaacatcacccagaaggttgag
tacgttgaggatgttgacaagcgctccgtccttctcgacattcttcacacccacgccggt
ggtctcacccttatcttcgttgaaaccaagcgcatggctgattcgctgtccgacttcttg
atcaaccagaacttccccgccacttccattcacggtgaccgcactcagcgtgagcgtgag
cgcgctttggagatgttccgcaacggtcgctgccccattttggtcgctactgctgtcgct
gctcgtggtttggatattcccaacgtcacccacgtcatcaactacgatctccctaccgat
attgatgactacgttcaccgcatcggtcgtaccggtcgtgccggaaacactggtattgcc
actgctttcttcaaccgtggcaaccgtggtgtcgtccgtgagcttcttgagctcctcaag
gaggctaaccaggaggttcccgccttccttgagaccattgctcgcgagtcctcgttcggc
ggtagcggtcgcggcggtcgtggtggtggtcgtggcggcggtcgtggtcgcactcaaact
gccgattaccgcaagttcggcggcggcggcggtggtggtggcttcggcggcggcttcggt
ggtgctcccgctagcggcggctacggtggtggcggctatggcggtggtgctcctcccgcc
ggtggctacagcggtggtggtggtgctggctacggcggcggtggcggcggcggtggcggc
tatggtggcggcggttacggcaaccctggcggtgccggtggccagtcttggtggtaa
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