Sordaria macrospora: 10805777
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Entry
10805777 CDS
T01610
Symbol
SMAC4_02815
Name
(RefSeq) uncharacterized protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
smp
Sordaria macrospora
Pathway
smp03018
RNA degradation
smp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
10805777 (SMAC4_02815)
09123 Folding, sorting and degradation
03018 RNA degradation
10805777 (SMAC4_02815)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smp03019
]
10805777 (SMAC4_02815)
03041 Spliceosome [BR:
smp03041
]
10805777 (SMAC4_02815)
Messenger RNA biogenesis [BR:
smp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
10805777 (SMAC4_02815)
mRNA degradation factors
5'-3' decay
Lsm complex
10805777 (SMAC4_02815)
Spliceosome [BR:
smp03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
10805777 (SMAC4_02815)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Gemin6
Peptidase_U32
Motif
Other DBs
NCBI-GeneID:
10805777
NCBI-ProteinID:
XP_024511387
LinkDB
All DBs
Position
1:complement(join(4167474..4167665,4167791..4167867,4168000..4168033))
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AA seq
100 aa
AA seq
DB search
MSAGLVNSYLNKRVCIITVDGRTLVGTLISVDMSTNVFLQRAVERVIRSPDDDEPSAEIE
LGTHMIRGDTVCLVGLVDEPLDASIDWTKVKGSTIGTTKH
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgggcttggtaaattcgtatcttaacaaaagggtctgcataatcacagtcgat
ggccgcaccctagtaggcacacttatctcggtggacatgagcacgaatgtgttcctacaa
agagcagtagaacgagtcatccgctcccccgacgacgacgaaccctcggccgagatcgag
ctgggaacgcacatgatccgcggtgacacggtctgcctggtcgggctggtggacgagccg
ctggacgcgagcatagactggaccaaagtcaaggggtcgacgatcgggacgacgaagcat
tga
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