KEGG   Sordaria macrospora: 10806128
Entry
10806128          CDS       T01610                                 
Symbol
SMAC4_01684
Name
(RefSeq) uncharacterized protein
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
smp  Sordaria macrospora
Pathway
smp03020  RNA polymerase
smp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:smp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    10806128 (SMAC4_01684)
  09124 Replication and repair
   03420 Nucleotide excision repair
    10806128 (SMAC4_01684)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smp03021]
    10806128 (SMAC4_01684)
   03400 DNA repair and recombination proteins [BR:smp03400]
    10806128 (SMAC4_01684)
Transcription machinery [BR:smp03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     10806128 (SMAC4_01684)
  RNA polymerase III system
   RNA polymerase III
     10806128 (SMAC4_01684)
  RNA polymerase I system
   RNA polymerase I
     10806128 (SMAC4_01684)
DNA repair and recombination proteins [BR:smp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      10806128 (SMAC4_01684)
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat NA-iREase1
Other DBs
NCBI-GeneID: 10806128
NCBI-ProteinID: XP_003348660
UniProt: F7VRJ9
LinkDB
Position
3:complement(join(754145..754673,754793..754875,754945..755037))
AA seq 234 aa
MEDDSSPTSASKEVSRLWRAWRTVHEMVQDRGYELAEDEVKISLERFKLEYTNEDGTPNR
GKLQFSARPSEAMIKKFTAPPTPSNPNPAPECGTIWVEFCTEKGSIGVSVMKKFVTHCSD
NKFKAGIFITAVPLSAQARKVMSVTSQYTQVECFLEEDLLVNITHHELVPKHVLLSKEEK
AALLKRYRLKETQLPRILSKDPIARYLGLKRGQVVKIIRVSETAGRYASYRLCV
NT seq 705 nt   +upstreamnt  +downstreamnt
atggaggacgacagcagccccaccagcgcctccaaggaagtctcccgcctgtggagagcc
tggaggactgttcacgagatggttcaggacaggggttacgagttggccgaagacgaagtc
aagatctcgctcgagcgtttcaagcttgaatacacaaacgaggatggaacaccaaaccgc
ggcaagctccaattctccgcccgtccctccgaagccatgatcaaaaagttcaccgcccct
cccacgccctccaaccccaaccccgctcccgaatgcggcaccatctgggtcgagttctgc
accgagaagggctccattggtgtttccgtcatgaagaagttcgtcacccactgctccgac
aacaagttcaaagccggcatcttcatcaccgccgtccccctgtccgcccaggcccgcaag
gtcatgtccgtcacctcgcagtacacccaggtcgaatgcttcctcgaggaggatctgctc
gtcaacatcacccaccacgagctcgtgcccaagcacgttttgctgtccaaggaggagaag
gccgcgctcctcaagaggtacagactcaaggagacgcagctacccagaatcttgagcaag
gatccgattgcccggtatttgggactcaagaggggtcaggtcgtcaagatcatccgtgtg
tcggagacggcgggtcgctatgcttcttacagactctgcgtataa

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