Sordaria macrospora: 10806222
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Entry
10806222 CDS
T01610
Symbol
SMAC4_01781
Name
(RefSeq) uncharacterized protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
smp
Sordaria macrospora
Pathway
smp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
10806222 (SMAC4_01781)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smp03021
]
10806222 (SMAC4_01781)
Transcription machinery [BR:
smp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
10806222 (SMAC4_01781)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
10806222
NCBI-ProteinID:
XP_003348758
UniProt:
F7VRU7
LinkDB
All DBs
Position
3:join(1134171..1135953,1136295..1136602)
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AA seq
696 aa
AA seq
DB search
MSAPPAGAPPTGAAPNGQQPPKKIIRKKAMADPLVARKKTLPKPQMARRPADWEARSRAS
ENAGQNRSLRQLEMKAMDHKRKRSMNPGNWSEQAQGYVEEFPLVVSKKELMELRFHVMQL
NNKHGNLDVTDQDQFPRPVTLQRRDPRLPPAHRMALKEEMEDVPMDDTEAERIRQEKEAK
EAQRALDQAKIAPVMKPNEPNKPQKKDKSMKTHVFHGKHSEEHKKALDLRYQETLPWHLE
DAEGKSGVWVGHYVAGLSEVNCALIQRQDKKIQMIPLTRWYAFHEKPKFNVLSLDDAENM
MKQNKDVKRWVMRDRERELTQKEKADTRMFLGGRARVKTESYTSRTAPKSERRDDYELDI
SGDEFQDDDETPGFEADDEEAKEAKERIRREQAAANLFGEGDQSKVDAEEREREMERLRL
KKTGKEVVKRLVKLEHAMDYDAGTDSERESDNPFADSDESEDENEEKKEGEEVKEEDKKD
GASGTNSKGTATPTGKQKAPDSAKKNKLKRAGSPNLSESSEAESNRKKAKLSATKGTASM
GQSRSNTPLPGRPKGATSDGEMSDGGAKSNRPPMKQTTLGGIVPNSRPGSPLQPGSPSGS
PPPISGGAAPANDFIKPEEVMAAIDQYPNGVALAVLMKPFSHRIDATPNRSKPHLSTKSE
WLGMVKRFGYLGPDKLIRRKTGAAQGGGSGAASPQP
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccctccagccggcgcccctcctactggcgctgctcccaacgggcaacagccg
cccaagaaaatcattaggaaaaaggccatggccgaccccctcgtggccagaaagaagacc
cttccgaaacctcaaatggcacgtcgacctgccgactgggaggctagatctcgcgcttct
gaaaacgccggccaaaacaggtctcttcgccagctcgaaatgaaggctatggaccacaag
aggaagagatccatgaatccggggaattggagtgaacaggcacagggctacgtcgaagag
ttccccttggtcgtgtcgaaaaaggagctcatggagttgcgattccacgtcatgcagctc
aacaataaacacggcaacctggacgtaaccgaccaggaccagtttccccgccccgtcacc
ctgcaacgccgggacccccgtctgccgcccgcccaccgcatggcgctcaaggaggagatg
gaggatgtgcccatggacgatacagaggctgagcgtattcgccaggagaaggaggccaag
gaagcccagcgtgcactggaccaggccaagatcgctcccgtcatgaagccgaacgagccc
aacaagcctcagaagaaggacaaatccatgaagacgcacgttttccacggaaagcactcc
gaggagcacaagaaagcgttggatctacgataccaggaaacactcccatggcacctcgaa
gatgccgagggcaagtcgggcgtctgggttggacactacgtcgccggtctgtccgaagtc
aactgtgccctcattcagagacaagacaagaagatccagatgattcccttgacccgttgg
tatgcctttcacgagaagccaaagttcaacgttttgtcactggacgacgccgagaacatg
atgaagcagaacaaggacgtcaagcgctgggtcatgcgcgacagggagagggagctgact
caaaaggagaaggccgataccagaatgttccttggtggacgtgcgcgtgtcaagacggag
agctatacgtcgagaactgctcccaaatccgagagacgggacgattacgagctcgacatt
tcgggcgacgagttccaggacgacgatgagacacctggtttcgaggcagacgatgaggag
gccaaggaggccaaggagcgtattcgtcgcgagcaagctgcggccaacctgtttggcgag
ggtgatcagagcaaggtcgacgcggaagaaagggagcgcgagatggagaggctcaggctg
aagaagacgggcaaggaggtcgtcaagcgtttggtcaagttggagcatgccatggactac
gatgcagggacagactccgagagggagtcggacaacccctttgccgattcggacgaatct
gaagatgagaacgaggagaagaaggaaggcgaggaggtcaaggaagaggacaagaaggat
ggcgcttcgggtaccaacagcaagggtactgcgacgccaacgggcaagcaaaaggccccc
gattccgcaaagaagaacaagttgaagcgtgctggctcgcccaacttgtcagaatctagt
gaagcggaatcgaaccggaagaaggccaagctttccgccaccaagggcacggcgtccatg
ggccagagccgatcgaatactcccctgcctggtcgtcctaagggtgctaccagtgatggt
gagatgtctgacgggggcgccaagagcaacaggcctccgatgaagcagacgacgcttggt
ggcatagtgcccaattctaggcccggtagccctcttcagccaggctctcccagcggctcc
ccgccacccatctcgggcggcgccgccccggccaacgacttcatcaagcccgaagaggtc
atggcggctatcgaccagtaccccaacggcgtcgcccttgccgtgcttatgaagcccttt
agccaccgcatcgacgcgacgcccaaccgctccaagccccatctatccaccaagtcagaa
tggctcggtatggttaagcgctttggctacttgggtcccgataagcttatcaggcgtaag
acgggggccgctcaaggtggaggaagcggtgctgctagtccccagccgtaa
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