Sordaria macrospora: 10806297
Help
Entry
10806297 CDS
T01610
Symbol
SMAC4_01858
Name
(RefSeq) uncharacterized protein
KO
K10858
DNA mismatch repair protein PMS2
Organism
smp
Sordaria macrospora
Pathway
smp03430
Mismatch repair
smp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
10806297 (SMAC4_01858)
03460 Fanconi anemia pathway
10806297 (SMAC4_01858)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smp03400
]
10806297 (SMAC4_01858)
DNA repair and recombination proteins [BR:
smp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
10806297 (SMAC4_01858)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
10806297
NCBI-ProteinID:
XP_065946430
LinkDB
All DBs
Position
3:join(1448992..1449033,1449101..1449197,1449254..1452663)
Genome browser
AA seq
1182 aa
AA seq
DB search
MASDGAIKAIDPSTIHQIQSGQVIVDLCSVAKELVENALDAGATTVDVRFKNQGLDSIEV
QDNGSGISSSNYESIALKHYTSKLATYDDLSNLQTFGFRGEALSSLCALSHFTIVTCTQK
EAPKATKLEFETSGKLKSTTVVSGQRGTTVSVENLFKSLPVRRRELERNIKREWGKVVNL
LNQYACIQTGVKFTVSQQPTKGKRMVLFSTKGNPTTRENIINVFGVKTMTALIAMDLRLQ
LKPTTTTGLLNKAPAAQDEDTTTEVRICGHISRPAHGEGRQTPDRQMFYVNGRPCGLPQF
AKVFNEVYRSYNSTQSPFIFADIQLDTHLYDVNVSPDKRTVLLHDQGQMLDNLRESLIEL
FELQDVTIPVSHIQPLKSSTFRGPSTAPSGSLTQARRRDSRDASEEPDSPLPSDTPGNGP
EGGRTTRSTINEDSGEPVSDDEAPSIRSTGSKAQAGPFRSTPANTQASNLLSRWLERKSE
VRKQSHKAAPITKDDNRERFLAEKGPQSPDRASGDGPKDAKSDAEQDIAEDNKDAEDGSR
TGKVVDEMEMDRDEPPISSIPPPSQPPIPKSSLLSISRPPKRLAQEEVATITIGDHSITS
VIGSSNKRSRLSERMGSVSLENSPKKGAKTVPVPSFGGRLTQLFAASAAASSGSSKGLEM
TTEDVEMADEEEDEEHSQVDNEEEKDDDSDEEALFVSQTKDVGTVEDDAVDEETENSADE
ERDGPTSGQNTQRRAEDEEDGETEPTEDAPSECCHHGDDDEEYIDEDEKKAQEEKKVQEM
IKAAETKANEPTEKGEKRSQSFVKGRFKKKDLTFNLIQRVKTSEDDIRSNMEASAKYLPT
AGRVASSTQESSNGEQATTTTTTTTTTTTTTTTTTTTTGLDAADAEEKLSLKISKSDFAK
MKIVGQFNLGFIIAVREASSSSSEPSSTQSATTTPREDDDELFIIDQHASDEKYNFERLQ
STTTVQSQRLVQPKPLVLTAVEEEIILEHLPILSQNGFSVHVDTSGDSPVGSRCSLLSLP
LSRETTFGVADLEELIFLLGDNPTSSATTAIPRPSKVRKMFAMRACRSSIMIGRALSRVQ
MEKVVRHMGEMEKPWNCPHGRPTMRHICGLGAAFGDGGTTGGKGKDKKRGFDEWKGGERE
RVDWKGWVWGKREEGEEEEEEGVEGEDEEGQQEEERGDEMSE
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagatggcgccatcaaggccattgacccgagcacgattcaccagatccagtct
ggtcaagtcatcgttgacctttgctctgtagccaaggaactcgtagaaaacgccctagat
gctggagcgacgacagtcgatgtccgattcaagaatcaaggtctcgattcgatcgaagtc
caggataatggcagcggaatatcgtccagcaattacgagtcgatcgcactgaaacactac
acttccaaattagcgacatacgatgatctttcaaatttgcaaaccttcggcttccgaggt
gaggccttgtcctccctctgcgccttgtcacactttaccatcgtgacatgcacccagaaa
gaggcgccaaaggctaccaaactcgagttcgagacatctgggaagcttaagagcaccacc
gttgtttcgggccagcgaggtacaaccgtctcagtggagaacctgttcaagagtctacct
gtccgccgccgcgagctcgaaagaaacatcaagcgagaatggggcaaagttgtcaaccta
ctcaaccagtatgcctgcattcaaaccggcgtcaaattcacagtgtcgcaacagcctacc
aagggaaagcgaatggtcttgttttcaacaaagggaaatcccaccacccgagaaaacatc
atcaacgtctttggcgtaaagactatgactgctctgatcgccatggacctcaggctgcaa
ctaaaacccaccactactactggactcctgaacaaggcgcctgctgctcaggacgaagac
acgacaacagaagttcgcatttgtggacacatctcccgcccagctcacggtgaaggtcgc
cagacgccagatcggcaaatgttttatgtcaatggaaggccttgcggtttgcctcagttc
gccaaggtcttcaatgaggtctatcgatcctataactcgactcaatcgccttttatcttt
gctgatatccagcttgacacgcatctttacgatgtcaacgtcagtccagacaagcgcact
gttttgcttcacgatcaagggcaaatgctcgataatctgagggagtccttgatagagctc
tttgagctacaggatgtcactatccccgtgtcacacattcaaccgcttaagagctccaca
ttcagagggccttcaacagccccttcgggatcattgacccaagctcgaaggagagacagt
agggatgcttcagaggaaccggacagtcctttgccttcagatacacctggaaatggaccg
gaaggcggcagaacaaccaggagtaccatcaatgaggactcgggtgagcccgtgagcgat
gatgaggcgcccagtatccggtctactggctcaaaagcccaggctgggccgttcagatcg
acacctgctaatacacaggcatcgaatctactttcacggtggcttgagcgaaagtctgag
gtccgcaaacaatcacataaagctgctcccattacgaaagacgacaacagggagagattc
cttgctgaaaagggcccgcagtctccagacagggctagtggagatggcccgaaggatgcc
aagtcggacgccgaacaggacattgcagaagacaacaaagatgcggaggacggctcaagg
actggcaaagtggttgatgagatggaaatggacagagatgaaccgccaatttcatccatt
cccccaccgtctcagccacctattccgaagagtagccttttatcgatatcacgtccaccg
aaacggttagcacaagaggaggtggcaacgatcactattggtgatcattccatcaccagt
gtgattggctcatccaataaaagatcccgactatcagagcgcatggggtcggtcagtctt
gagaactcgccgaagaaaggggctaagactgttcccgtgccttctttcggtggccgtttg
actcagctgtttgctgcttcagctgctgcatcttcggggtcatcaaagggccttgaaatg
acgactgaggatgtagagatggccgatgaagaagaggacgaagaacacagccaagtggac
aacgaagaagaaaaggatgatgactctgatgaggaagcacttttcgtgagccaaacaaag
gatgtgggcacagtggaagatgatgctgttgacgaagaaactgaaaactcagctgatgag
gagcgcgatggtcccacaagtggccagaacactcaacgcagggcggaggacgaagaggat
ggtgaaactgaacctacagaagatgcgccttctgagtgttgccaccatggcgacgatgac
gaggaatacatcgacgaggatgagaagaaggctcaagaagagaagaaggtgcaagagatg
atcaaggcagctgagacgaaggcaaacgagcctactgaaaagggcgaaaagcgctcccag
agcttcgtgaaagggcgattcaaaaagaaagacttgacgttcaatctcattcagcgtgtg
aagaccagcgaagacgacatccggtctaatatggaagcctcggcaaagtacctacccacc
gccggcagagttgcctcgtctacacaagagagcagcaatggggaacaggcaacaacaaca
acaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaggtctc
gacgccgccgacgccgaagagaaactatccctcaagatctccaaatccgactttgccaag
atgaaaatcgtcggccagttcaacctcggcttcatcatcgctgtccgggaagcttcttct
tcttcttcagaaccttcttcaactcaaagcgccactaccaccccccgagaagacgacgac
gagctcttcatcatcgaccaacacgcctctgacgaaaagtacaacttcgagcgcctccaa
tccaccaccacggtgcaatcccagcgcctcgtccagcccaaaccgctcgtcctcaccgcc
gtcgaagaagaaatcatcctcgaacacctgcccatcctctcccaaaacggcttttccgtg
cacgtcgacacgtcaggcgactcgcccgttggttcccgctgcagtcttttatctctgccc
ttgtcacgcgaaaccacgtttggcgtggccgatctagaagagttgattttcctactgggt
gataatcccacctccagtgccaccacggcgataccgagacctagtaaggtcagaaaaatg
tttgctatgcgagcgtgtagatcgagtatcatgattggacgggcgctgtctagggtgcag
atggagaaggtggtcaggcatatgggcgagatggagaagccgtggaattgtccgcatggg
aggccgactatgagacatatttgtgggttgggggcggcgtttggggatggtggtactaca
ggtggtaaaggaaaggataagaagagggggttcgatgaatggaagggcggagagagggag
agggtggattggaaggggtgggtttgggggaagagggaggaaggggaggaggaggaagag
gaaggggtggaaggagaggatgaggaagggcaacaggaagaggaaaggggggatgaaatg
agtgaatga
DBGET
integrated database retrieval system
