Sordaria macrospora: 10806393
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Entry
10806393 CDS
T01610
Symbol
SMAC4_01956
Name
(RefSeq) uncharacterized protein
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
smp
Sordaria macrospora
Pathway
smp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
10806393 (SMAC4_01956)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smp03019
]
10806393 (SMAC4_01956)
Messenger RNA biogenesis [BR:
smp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
10806393 (SMAC4_01956)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
10806393 (SMAC4_01956)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
DDHD
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
10806393
NCBI-ProteinID:
XP_065946794
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All DBs
Position
4:complement(join(1869760..1870947,1871025..1871558))
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AA seq
573 aa
AA seq
DB search
MPPPPINRFPSGPSPYHQQFPTHGQHTASHPPQLAANPAYLNQNAQVNPFSANSNLLGLG
GALNAGGGGFNVGGDSGLASHAARMSFQHGAQLQQQQQAQQQHQQQAQQQTAQHPQHAQH
AQHQQHMQHAPQQGHGALADHPTRSQQKSRIREVWKYNLHDEMAILRDLVDKYPYIAMDT
EFPGVVSRPMGGFRGKSDYHYQCLRTNVDMLKVIQIGIALFNEDGEQPPARPNSTDSMDL
AGKRAANQQGPFPFAWQFNFKFSLKEDMFNQTSIESLQQAGIDFNLLERDGIDPKEFAAL
LIPSGLVCFEEVRWISFHGGYDFGYLTKLLICSQLPNDEVEFDQIMKLYFPSTYDVKHLM
KHAIKQYNSGALTPNDPGAAEILQKFEQKSGLEHIADTLKVKRVGSAHQAGSDSLITGKV
FFELRKRIFNGDIGGEHVGKVWGLGIPDFSVVASLPSLNTAAATASNNNNNSANAESSST
GQQQNGAQNGTPSTPNGASVNLAGALAAAGANAAQAAVAAQAAAAASHNTNGGAAAALGN
LGPMTPGGGGGVFGQFAFGNNSNNSNNSSANRG
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctccacccatcaacaggttccccagcggaccttcgccctaccatcagcagttt
cccacacatggccagcacacggcaagccatcctccgcagctggcagcaaaccccgcctac
ctcaaccagaacgcccaagtgaaccccttttcggcgaatagcaacctattaggcctgggc
ggggcactgaatgctggtggtggcggcttcaatgtggggggagactcggggctggcgagc
catgctgcgaggatgtcattccagcacggggctcagcttcagcaacaacagcaagctcaa
caacaacaccaacagcaggctcaacaacagacggcccaacacccacaacacgctcagcat
gcccagcaccaacagcacatgcagcacgcaccacaacagggccacggtgcccttgccgac
catcccacacgatcgcagcaaaagagccggatacgggaggtgtggaagtacaacttgcac
gacgagatggccatactgagagacttggtggacaagtatccgtacattgctatggacacc
gagtttcccggcgttgtgtcgagaccgatgggcgggttcaggggtaagagcgactaccat
taccaatgtctcaggaccaacgtcgacatgttgaaggtcatccagatcggcatcgccctg
ttcaacgaagacggcgagcagccccccgcacgaccaaactcgaccgattctatggacctt
gcaggaaaaagggcggccaatcaacaggggccgtttcccttcgcgtggcagtttaacttt
aaattctcccttaaggaggacatgtttaaccagacctcgatcgagtctctgcagcaagcc
ggtatcgacttcaacctactggagagggacggcatcgaccccaaggaattcgccgcgttg
cttatcccatctggcttggtgtgtttcgaagaagtgcgctggatcagcttccacggtggc
tacgactttgggtaccttacaaaacttttgatctgttctcagcttcctaacgacgaggtt
gagtttgatcagatcatgaagctctattttccctcaacgtatgacgttaagcacctcatg
aagcacgcgatcaagcaatacaacagcggtgcgctgacccccaacgatccgggtgcagcc
gaaatccttcaaaagttcgaacagaaatccggcctggaacatatcgccgacactctcaag
gttaagcgcgtgggtagtgcacaccaggcgggtagtgacagccttatcaccggcaaggtc
tttttcgagctacggaagcgcatctttaacggagatatcggtggcgagcacgtcggtaag
gtctggggtcttggcattcccgatttctctgttgtagccagccttcccagccttaacacg
gcagccgcgactgctagcaataacaacaataacagcgccaacgccgagagctcatcgact
ggacagcagcaaaacggtgcgcagaacggaacccccagcacgcccaacggcgcttcagtg
aaccttgccggtgcactcgcggctgcgggcgccaacgcagctcaggcggccgtcgccgca
caagctgccgctgccgcttcgcacaacaccaacggcggtgctgcggcggcgctgggcaac
ctcggacctatgacccccggtggcggaggtggcgtgttcggccagtttgcgttcggcaac
aatagcaacaatagcaacaatagcagcgccaaccgaggttag
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