Sordaria macrospora: 10806486
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Entry
10806486 CDS
T01610
Symbol
SMAC4_09052
Name
(RefSeq) uncharacterized protein
KO
K14307
nucleoporin p58/p45
Organism
smp
Sordaria macrospora
Pathway
smp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
10806486 (SMAC4_09052)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smp03019
]
10806486 (SMAC4_09052)
Messenger RNA biogenesis [BR:
smp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
10806486 (SMAC4_09052)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup49_C
Nucleoporin_FG
Sec3_CC
DUF2458
Motif
Other DBs
NCBI-GeneID:
10806486
NCBI-ProteinID:
XP_065946641
LinkDB
All DBs
Position
3:join(5283359..5283642,5283726..5284493,5284581..5285538)
Genome browser
AA seq
669 aa
AA seq
DB search
MVCAFWGTELNQLSTRYLCLVPCSSQSSRINLQKFNPRVRHLHIFTTTRNSQVAYPLHIH
KLQFPIFTLLGINMFRSASGPAGLSINTGTANSLFGSNTPAQSTGTGFGTATAQQQQQQP
QNTGSLFGAPTPASGGLFGGGTTTSQQQQQQQTPNLFGQPAQQQPQQQQAFGGGGIFGQP
QQQAQQQQTGGTFGQPQQQQPSGGIFGQPAQQQQQQAQQQQQMSLFGGGTTTTPAATGGG
GLFGGGATTQQQPAQNTGTSLFGGGAAQPAQQQTTGTSLFGTAQPAQQQNTGTTSLFGQP
QQQQQQQQQQQPAQQQPAQQQQTASLFGGTGGAFLFGTTKPATTTLGGTSFGTTQPSTTS
TQQQPTSTGLSLSMGQNTTTQQQQSAGSKIDLAALRSTTRFSDLTDSLQAQLTQIDDSIQ
KCISDCSAINAFLPGHESQLSSIPVDVSFVSRKSEGAAGALNSDVLAIASLKETVKKDAA
NAKLSFKSIDQLRLPGGYWQAGLWSSSAAGGASRSGAGQQQGDNSGTPKTSATKSSTGQK
TGQQEDEEAEAESNQDLLGYFSKTADEMDEMMKRFERNLGEIEVHLHGVQGNVLEQLQRA
AFGQQKQLAQGGGQDSAMNGDGQVDHRVVELAGVLRDFEESILKVAGVVGGVKEGITELQ
LRDFMGHGS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggtctgtgcgttttggggaactgaactgaatcaattgtctacccggtacttgtgtctt
gtgccttgcagcagccaaagcagccgcatcaatcttcaaaagttcaacccgcgcgtcagg
catctccacattttcacaacgacacggaattcacaagtcgcgtatcccttgcatatccat
aaattacagtttccaatatttacacttcttggtatcaacatgtttcgttcagcaagtggt
cccgctgggctaagcatcaatacgggcactgccaatagtctatttggaagcaacacgccc
gcacagtccaccggcaccggctttggcacagcaaccgcacagcagcagcagcagcaaccg
caaaacacgggatccttgtttggagccccgactccagccagtggaggtttgtttggagga
ggaacaacaacttcgcaacaacaacaacaacaacaaaccccaaacctctttggccagccc
gcgcaacaacaaccacaacagcaacaggcattcggcggcggaggaatattcggacaacca
cagcaacaggcgcaacaacaacagacgggtggcacattcggacagcctcaacagcaacag
ccgagtgggggaatctttggtcaaccggcgcaacaacagcaacaacaagcacaacagcaa
cagcagatgtctcttttcggaggaggaaccaccacgacccccgccgcgacgggcggtggc
ggccttttcggcggcggcgcaaccacacagcaacaaccggcgcagaacaccggcactagc
ttgttcggaggcggcgctgctcaaccagctcagcagcagacgactggcacatcgctcttt
ggcaccgcccagccagctcagcaacaaaacaccggcaccactagtctgttcggccagcct
cagcaacagcagcaacagcagcaacagcagcagccggcgcaacagcagccggcgcaacag
cagcagaccgcatctctgttcggcggcacaggcggcgcctttctctttggcaccaccaag
cccgcgacgactacactcggcggcaccagcttcggcacgacccaaccatccaccaccagc
acccaacagcagcctacttccacaggcctcagcctgtccatgggccaaaacaccaccact
caacagcaacaatccgccggctccaaaattgacctcgccgccctgcgctccaccacgcgc
ttctccgacctcaccgactctctccaagcgcaactaacccaaatcgacgactccatccaa
aagtgcatctcggactgctccgccatcaacgcctttcttcccggccacgaatcgcagctc
tcttcgattcccgtagacgtctccttcgtctctcgcaagtccgaaggcgcagccggcgct
ctaaacagtgacgtcctagccatcgcctctctcaaagaaaccgtcaagaaggacgctgcg
aacgccaagctcagtttcaagagcatcgaccagctgcggctgccgggggggtattggcag
gctggtctttggtcttcttctgcggctggtggtgcttcgcggtctggtgcgggacaacag
cagggtgataacagcgggaccccgaaaacgagcgcaaccaagtccagcaccggccaaaag
acgggccagcaagaagatgaagaagccgaagcggagtccaaccaggatctgctcggctat
ttttccaagacagcagacgagatggacgagatgatgaagaggtttgagcgcaacctgggc
gagatcgaggtgcatttgcatggagtgcagggcaatgttttggagcagttgcagagggct
gcttttgggcagcagaagcagctggctcaaggtggtggtcaggacagtgcgatgaatgga
gatggccaggttgatcacagggtcgtggagctggcgggcgtgttgagggactttgaggag
agcattctcaaggttgctggggttgtgggaggtgtgaaggagggcattacggagttgcag
ttgagggattttatgggtcatggttcttag
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integrated database retrieval system
