Sordaria macrospora: 10807097
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Entry
10807097 CDS
T01610
Symbol
SMAC4_03190
Name
(RefSeq) uncharacterized protein
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
smp
Sordaria macrospora
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smp03016
]
10807097 (SMAC4_03190)
Enzymes [BR:
smp01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
10807097 (SMAC4_03190)
Transfer RNA biogenesis [BR:
smp03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
10807097 (SMAC4_03190)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
ThrE
Motif
Other DBs
NCBI-GeneID:
10807097
NCBI-ProteinID:
XP_065946223
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All DBs
Position
2:complement(4767246..4769147)
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AA seq
633 aa
AA seq
DB search
MAENMITTTMSQPGVSPSKSGEVAPTSINPAATSTPPRPPRVPYHQIYKLPAPIRTFPLP
TFYPSNPLSLFHLAFAWLRQVLLPPPAEPSVIHEGIWDPDTRSVHVKDPKSIRAFWEQGF
YGKGSLSRSEPNWFKRELSRRGLDATTVSEERTVSRREERKQVKWERAKAELEAIEKQKL
EEAQLDSEPVNAAVPESLAAEVEPKPAVLPASLPDPVLSVTSTASSSQPATTDEYVPKTV
AHGSIVEHKAPVGPLELLALPNSYARVRGEEPVLSQPESTITEENVRKEFKPPVGPIELL
ALPNSLADLVALSVVSVLSEEIGIDEDGSSEDQVEASALTNDEPETSATEVNDTASSVSS
PSTDGLPDSQPAQEGNPATLERRKSVRFSPTVESTIFQHTDAASEVKNNNGSSDTEAISS
ALPAVEKPVISDVVPAVYSEELVDKEHFQLAPEEAFFLAFGLGALRVVDPVTKAPISNEQ
LLANLRANSYFPPRSVDNLSPEDPFLVQYAAYHHFRSFGWVPRHGIKFGVDWIIYQRGPV
FDHSEFGIMVVPSFSDPRWSEYEHEESKKSWSWLMGVNRVLAHVLKSLVLVYVDVPPPPV
FDEEMKKGGIAAALKKFTIREVMVRRFSVNRNR
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaacatgatcactactacaatgtcgcaacctggcgtatcaccgagtaaatcc
ggggaagtagctcctacgagcatcaaccccgcggcaacatctacgccgcctcgacccccc
agagttccctaccaccagatctacaagctccctgcgccaattcgtacctttccgctgcct
accttctaccccagcaaccccctttctctctttcaccttgccttcgcgtggttgagacaa
gtgttgttgcctccgcccgccgaaccatcagtgatacatgagggaatctgggatcccgat
actcgctccgtacacgttaaggaccctaagtccatccgcgccttctgggaacagggcttc
tatggaaaaggaagcttgagtcgtagtgaacccaactggtttaagagagagctgagccgc
cgcggtcttgacgcgacaacggtcagcgaagaacgcaccgtgtcacgccgtgaagaacgc
aagcaggtcaaatgggaaagagcaaaggcagagctggaggccatcgagaaacaaaagctc
gaggaagcccagcttgacagtgaacctgtgaatgctgctgtcccagagtctcttgccgcc
gaggttgagcccaagcctgctgttctacccgcctctcttcctgatcctgttctctctgtc
acttcaaccgcttcatcatcccagcctgcaactacggacgagtatgttcccaagacagta
gcacatggatctatcgtcgagcacaaagctccagtcggccccctggagcttctcgccctt
cccaactcgtatgctcgtgtccggggcgaggagccggtcctttcgcagcctgagtcgaca
atcactgaagagaacgtgcgcaaggaattcaagccgcctgttggtcccattgagttgttg
gctctccccaattctctggccgatcttgtcgcactatcagtcgtatccgtcttgagcgag
gaaatcggtattgatgaggatgggtcttcagaggatcaggtggaggcaagtgccttgacc
aacgacgaacccgagaccagcgcaaccgaagtcaacgatacagcctcttccgtttcttct
ccctctacggacggactcccagacagccagcccgcacaggaaggcaaccccgccactctt
gagaggagaaagagcgtccgcttctcccccaccgtcgagtctaccatcttccagcacacc
gatgcagcctctgaagtcaagaacaacaacggctcgtctgacactgaagccatctcttcc
gctcttcctgccgtcgaaaagcccgtcatctccgatgtcgtacctgccgtttattccgag
gagttggttgacaaggaacacttccagttggcccccgaggaggccttcttcttggccttt
ggcctcggtgctcttcgcgttgttgacccagtcaccaaggctcccatctcaaacgagcag
cttctcgccaaccttcgtgccaactcttattttcccccgcggtccgtcgataacctcagt
cccgaggatcccttcctcgtacaatacgccgcttatcaccacttccgctcctttggctgg
gtgccccgtcacggtatcaagtttggcgtcgactggatcatttaccagcgcggcccggtt
tttgaccattccgagttcggtatcatggtggtgccctcgttctccgaccctcggtggagc
gagtacgagcacgaggagtccaagaagagctggtcttggctgatgggtgtcaaccgtgtg
ttggcccatgtgctcaagagcttggttctcgtctatgttgacgtgccgcctccgccggtg
ttcgacgaggaaatgaaaaagggcggtattgcggctgccctcaagaagttcacgatccgt
gaggttatggttaggcggttctctgtcaaccgcaacaggtag
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