Sordaria macrospora: 10807566
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Entry
10807566 CDS
T01610
Symbol
SMAC4_00946
Name
(RefSeq) uncharacterized protein
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
smp
Sordaria macrospora
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smp03036
]
10807566 (SMAC4_00946)
Chromosome and associated proteins [BR:
smp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
10807566 (SMAC4_00946)
microRNA pathway
RISC loading complex
10807566 (SMAC4_00946)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
DSRM_2
Dicer_dimer
Ribonucleas_3_3
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
10807566
NCBI-ProteinID:
XP_003350057
UniProt:
F7VNJ3
LinkDB
All DBs
Position
3:complement(join(3764411..3766087,3766141..3768791,3768854..3769286))
Genome browser
AA seq
1586 aa
AA seq
DB search
MEMDTMLPFNLPETASQIIVDNQDLIDLSQEDVASEHDDRGDASDVESDGGVKRWTVNPE
PKPKKISAKKQADSAAFNSWIEEHHETLARDQRKAAIEAARLAGADVVPAIGFDSQRIIT
SPREYQVELFERAKQQNTIAVLDTGSGKTLIAAMLLRWVINGELEDREKGFPRRIAFFLV
DKVALVFQQHSFLTKNLDFPMEKLCGEMMEGVESKAFWKEALEHNEVVVCTAEILNTALH
HSWIRMDQINLLIFDEAHHTKKDHPYARIIKNFYVDEKLERRPRILGLTASPVDANVDPG
RAAAELEALLHSQIATAADPASLQPKICRPKAELLVEYARGRPDSETALNKQLRKLVGGQ
ELFKKPVNFTTSAASTLGPWCVDRYWQLYFKQEDIVKLEARTERDLMKASALGEITEKNV
KQVRDAHELVNAHTFLPAALDPAMFSDKVIMLVRILRDQFETGVGTQRCIVFVRQRNTAM
LLADLLQQPGIKSHIPSIVAEVLVGGGTTGSGYVNAKVNFQQQNRIIRKFKLGEINCLFA
TSVAEEGLDIPDCNIVIRFDLYDTLIQYIQSRGRARRPDSRYIQMIEKGNPEHYTKIVQA
KKAEDTLRNFCKALPEDRKLTDNHMNLDYLLRKEKGKRQYTVPETGAKLSYMQSLICLAN
FTATLPHPPETSLSPEYYITTVPGGFQCEVVMPDASPIKSAVGKIHVSKGAAKCAAAFEL
CLALLKAGHLDNHLQSVFTKQLPEMRNARLAVSSKKKTEYAMRLKPELWSVRGEVTQLYA
TAFFLENPDARGRSSRPLLLLSRSGLPEVASFPLFFGTKRFSKVRCVPIQGSVEAEDTLV
EQLTRFTMKAFMDVFSKEYEATAADLPYFLSPMDGGHGFDFRLAKSPADLIDRKTLAYVS
GNEKVPYTFLEPDEFFQDKFIVDPYDGARKFFTRHRRHDMKPTDPVPDGIVQPNHRAWKG
LGTTHDILNYSNSLWAKSRGFMVFQADQPVVEARLISTRRDFLDDAILDEDLEPQPCFLA
LEPLRISPIPADVAAMLLCFPSIIHRVESNLVALDACKLLGLDLRPDLALEAFTKDSDNS
NEHDVEQVNFQTGMGDNYERLEFLGDSFLKMATTMSIYTLIPDKGEFEYHVERMLLICNK
NLLNNALEVGLEEYIRSMSFNRRQWYPEGLVLKKGKNKDARTRHVLADKSIADVCEALIG
AAYLTGQEKGSFDMAIKAVTAMVRDKKHRMMNYGDYYAVYQKPSWQTAPANSAQRDMADK
FSERMGYKFKHPRLLRAAFQHPTYPSLYERLPSYQRLEFLGDALFDMVAVDYLFRKFPAA
DPQWLTEHKMAMVSNQFLCCLSYHLGFYKCVATMSPSILKDIAEYVTEIEEALEAAKQEA
VNQGKAPEEYSRDYWVHITHVSRLPKCLSDVVEAYIGAIFVDSEYDYSVVQQFFTTHVLP
FFEDMHLYDSFANKHPVTFVANMMAHKFCCQEWRSLAKELDTDVSEGRGGRGGAVAGEIT
EINPPKVVSALLVHGKTVAHAVAASGRYAKSAMAKKAIKMLEGMTVEEFREKLGCDCKGV
PMEVDGGVAAEADVVDEDGEVHGTAV
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atggagatggataccatgttacccttcaacctaccggagacggctagccagatcatcgtt
gacaatcaagacttgatagatctttcccaagaagacgtggcttctgaacacgatgacaga
ggagatgcctctgatgtcgagagcgacggcggcgttaagagatggacagtaaatccggaa
cccaagcccaagaagatttcagccaagaagcaggccgacagtgcggctttcaactcgtgg
atcgaggagcaccatgaaactctggccagggatcagaggaaggcggcgatagaagccgca
agattagccggcgcggatgtggtgcccgctattggctttgatagccaaaggatcatcact
tcaccacgagaataccaggtggagctctttgaacgcgcaaagcaacaaaacacgattgcc
gttctggatacaggatctggaaagactctgattgccgccatgttgttacgctgggtcatt
aatggtgagctggaggaccgagaaaagggattccctagacggattgccttcttcctggtc
gacaaggttgccttggtgttccaacaacacagcttccttaccaagaacctcgacttccca
atggagaaattatgcggtgaaatgatggagggtgtcgagtcaaaagccttctggaaggaa
gcattagagcacaacgaagtggtcgtctgtacagctgagattctcaacacagcgctccat
cattcatggattagaatggaccagataaacctcttgatctttgacgaagcccatcacacc
aaaaaggatcatccttatgctcgcatcatcaagaacttttatgtcgatgagaagctcgag
aggaggccgagaatccttggcttgacggcctctccggtcgatgccaatgtcgatccagga
cgggctgcggcagaactagaggcattgcttcacagccaaatagccacagcggccgatccg
gcctcccttcagcctaaaatttgcagacccaaggccgagttgctcgttgaatacgcccgt
ggtcgacctgactcggagacagctctcaataagcaactacgcaaacttgttggggggcaa
gagctgttcaagaagccggtcaactttactacatcggcagcatccacgttgggcccatgg
tgtgttgaccggtattggcagctctacttcaaacaagaggatatcgtcaagctggaagca
cgcactgagagagatctcatgaaagcctcggcccttggtgagatcactgagaagaacgtc
aagcaagtccgtgatgcgcatgagttggtcaacgcgcacacatttttacccgctgctctc
gacccggcgatgttctcggacaaggttatcatgcttgttagaatcttgcgtgaccagttc
gagacgggcgtgggtacgcaaaggtgcattgtttttgttcgacaacgtaacacggccatg
ctgttggcggacttgcttcagcagcccgggataaagtctcacatacccagcattgtggca
gaagtcctggttgggggtgggacaactggctcaggctatgtcaacgccaaggtcaacttc
cagcaacaaaacagaattattcgaaagttcaagctcggtgagatcaactgcctatttgca
acttccgttgccgaggaaggcctcgatattcctgattgcaatatcgtcatcagatttgac
ctctatgatactctgatccagtatatccagtcgcgtggtcgagctcgtcgtccagattct
cgctacatccaaatgatagagaaaggaaatcccgagcactacaccaagatagtgcaagct
aaaaaggctgaagatacattgcgcaacttctgcaaggctctaccagaagacaggaagcta
actgacaatcacatgaacctggactatctcctccggaaggaaaagggcaagaggcagtac
accgtcccagaaactggtgcgaaactcagctatatgcaaagcctcatttgtctcgccaat
tttacagccaccctaccacacccaccggagacgagcttgagtcccgaatactacatcacc
actgttcccggtggcttccagtgcgaggttgtcatgcctgacgcatcgcctatcaagagt
gcggttggcaagatacatgtgagcaagggggctgccaaatgtgcagctgcctttgagctc
tgtcttgctttactcaaggctgggcacttggataaccacctccagtccgtgttcactaag
cagctgccggaaatgcgaaatgcacgccttgctgtcagctcaaagaaaaagacggagtac
gctatgcggctgaagcctgagttatggtcggtccgaggcgaggtcacccagctttatgcc
actgcgttttttctggaaaacccggacgcccgtgggcgtagctctcgtccacttctcctg
ctgagtagaagcggtctcccagaggtagcgtcctttccgctctttttcggaaccaagcgc
ttttccaaagtccgttgcgtgccaattcaaggttcagtcgaggctgaagatacgttggtg
gagcaacttactcgtttcactatgaaggcttttatggatgttttcagcaaggaatacgag
gctacagcagccgaccttccgtacttcctctcgccgatggatggaggtcacgggttcgac
ttccgcttggccaagagcccagccgatctcattgaccgaaagacgctagcatacgtcagt
ggaaacgagaaggtgccgtacacctttcttgagccagatgaatttttccaagacaagttt
atcgtggacccatacgacggagcacggaagttctttactcgtcaccgccgccatgacatg
aaacccacggatcccgtgccagatggcatcgtccagccgaatcacagggcttggaaaggc
ttaggcaccacacatgacattctgaactacagcaatagcttgtgggcaaagtcgcgtggt
tttatggtattccaggcggatcagcctgtcgtggaggctaggcttatttccactcgtcga
gactttcttgacgatgccatcctagatgaggatttggaaccacaaccgtgcttcctagct
cttgaaccgttgaggatttcacctataccagcagatgtggcggcgatgcttctctgcttc
ccatcaatcatacaccgggtagagtccaacctagttgcgttggacgcatgcaagcttctg
ggtctagacttgcgcccagacctcgcccttgaagccttcaccaaggacagtgataactcg
aatgagcatgatgtcgagcaggtaaacttccagactggaatgggtgacaattacgagagg
ctcgagttcctcggtgactctttcttgaagatggcaaccactatgtccatctacactcta
atccccgacaagggtgagttcgagtatcacgtcgagcgtatgcttcttatttgcaacaag
aacctgctcaacaacgccctagaggtaggcctcgaagaatacatccggtccatgtcattt
aaccggagacagtggtatccggagggcctagttctgaaaaaaggcaagaacaaggacgcg
cgtacgcggcatgtcctggccgacaagtccattgccgacgtgtgcgaggccctcatcggc
gccgcctacctcacgggacaagagaagggcagcttcgacatggccatcaaggccgtaacc
gccatggtcagagacaagaaacaccgcatgatgaactatggtgactactacgctgtatat
caaaagcctagttggcagacggcaccggccaacagcgcccagcgcgacatggccgataag
ttctcggagcgcatgggctacaaattcaagcatccacgtctcttgcgcgccgctttccag
cacccaacctacccgtccctctacgaacgcctcccgtcgtaccagcgtctcgagttcctc
ggcgacgcgctcttcgacatggtcgccgtcgactacctcttccgcaagttccccgctgcc
gacccgcaatggttgacggagcacaagatggccatggtatccaaccagttcctatgctgt
ttgtcctaccacctgggattctacaagtgcgtcgccaccatgagcccatccatcctcaag
gacatcgccgagtacgtcaccgagatagaagaagcactcgaggcggccaagcaggaggcc
gtcaaccagggcaaggcacccgaagaatacagccgcgattactgggtgcacatcacgcac
gtttcccgcctgccaaaatgtctgtcggacgtggtcgaagcctacattggcgccattttt
gtggatagcgagtacgattactcggtagtccagcaattcttcaccacccacgtcctaccc
ttcttcgaggatatgcatctctacgactccttcgccaacaaacacccggttacttttgtg
gcgaacatgatggcgcacaagttctgctgtcaagaatggaggagtctggccaaggagctg
gacacagacgtatccgaaggaagaggaggaaggggtggtgcggtggcgggtgaaattact
gagatcaacccgcccaaggtggtgtcggcgctactggtccacggcaagacggtggcgcat
gcggtggcggccagtggaaggtatgcgaagagtgctatggcgaagaaggctattaagatg
ctggagggtatgactgtggaggagttcagggagaagttggggtgtgattgtaagggggtg
ccgatggaggttgatggtggagtggcagcggaagcggatgtggtggatgaggatggggag
gtgcatgggacggctgtttaa
DBGET
integrated database retrieval system
