Sordaria macrospora: 10807569
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Entry
10807569 CDS
T01610
Symbol
SMAC4_00949
Name
(RefSeq) uncharacterized protein
KO
K18664
antiviral helicase SLH1 [EC:
5.6.2.6
]
Organism
smp
Sordaria macrospora
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smp03019
]
10807569 (SMAC4_00949)
Enzymes [BR:
smp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
10807569 (SMAC4_00949)
Messenger RNA biogenesis [BR:
smp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
10807569 (SMAC4_00949)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
ResIII
Helicase_C
AAA_22
DEXQc_Suv3
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
10807569
NCBI-ProteinID:
XP_065946559
LinkDB
All DBs
Position
3:complement(join(3773009..3778186,3778259..3779290))
Genome browser
AA seq
2069 aa
AA seq
DB search
MAAGPSINGGLDIAAWRAQIETMKAAVAGLPPSASEAGGSSTNSDWDDDEIDSSTYSPTR
NGDGPRDIWDFISDDELDSIEFADGGDYYHDHETDGAEDGFAGGSGSGSGYGFGWLASRC
ADVRSASGLGAGALQDQIMEILGSGKSEDELQSSLTDLIGFDDLDFVIDLISHREELVSS
VGRALKQQQQQQQQQQQQHQQQEQGNGPDGLRLLSKAQRQAALQQRDYEHKSTPLAAARS
KEEEYPHVYRAYSAGNTLSHSGKRYALPPGSERKEHEKYEEYTIPAGKTGTLGAGRKLVN
IADMDGLCRNTFRGYKTLNRMQSLVYPVAYKTSENMLICAPTGAGKTDAAMLTILHTVGQ
YLTPSPFEDHVTTDFAVAAEDFKIVYVAPMKALAAEITEKLGKRLAWLGIRCREFTGDMH
LTKSEIVQTQIIVTTPEKWDVVTRKGTGDTELVQKVRLLIIDEVHMLHDERGAVLESLVA
RTARQVESTQSLIRIVGLSATLPNYVDVADFLNVNKYAGLFYFDASFRPVPLEQHFIGVK
GKPNSKQSRENLDQVAFEKVREMLECDHQVMVFVHSRKDTQATAKMLFEKATDEACTDLF
DPSYHEKYEAAMRDARGTKAREIRELIPKGLGIHHAGMARSDRNLMERLFAEGVIKVLCC
TATLAWGVNLPAAAVVIKGTQVYSAQDGKFVDLGILDVLQIFGRAGRPQFEDTGIGMICT
THDKLAHYLTAITDQLPIESRFSAKLVDNLNAEIALGTVTSIPEAVKWISYSYLFVRMKR
NPMAYGIDWSEYDNDRSLVQRRRQLAIQAARTLQQSQMIIFNEATEELRSKDIGRIASQF
YIQHSSVQIFNSMMRPFSTEEDILKMIAMSGEFDNIQSRNEEANELMAMKHDERFVPYKV
STGIDQPHTKTNILLQAYISRAQPQDFALTNDLNYVAQQAGRICRALFMIALNRRWGHQC
LVLLTMAKSIEKRIWAFQHPFHQFDRDLPKPVLNKLDELEALNIESMREMEPAEIGSLVN
NHRMGGKITKLLDNFPTLSVEAEIAPLNRDVLRIKLYVTPDFRWNDHLHGTSESYYIWVE
NSETSEIYHHEYFILNRRKLHDDHELNFTIPLSDPMPNQIYVRAVSDRWLGAETVTAVSF
QHLIRPDTESVYTDLLNLQPLPVSALKNPALEEIYAQRFQYFNPMQTQVFHTLYHTPANV
LLGSPTGSGKTVACELAMWWAFRERPGSKVVYIAPMKALVRERVKDWGARLAKPLGLKLV
ELTGDNTPDTRTIQDADIIITTPEKWDGISRSWQTRGYVRKVSLVIIDEIHLLAGDRGPI
LEIIVSRMNYIASSTKNSVRLLGMSTACANATDLANWLGVKEGLFNFRHSVRPVPLELYI
DGFPEVRGFCPLMQSMNRPTFLAILNHSPEKPVIVFVPSRRQTRLTAKDLINFCGLEDNP
RRFLHMDEDDLQLNLSRVKDDALKEAISFGIGLHHAGLVESDRQIAEELFLNNKIQILVA
TSTLAWGVNLPAHLVVVKGTQFYDAKIEAYKDMDLTDVLQMLGRAGRPQFDNSGVARIFT
QDSKKDFYKHFLHTGFPVESSLHTVLDNHLCAEVSAETIVTKQDALDYLTWTFFFRRLHK
NPSYYGLEISAEEHSSTMAQQLANDYMIQMVDHSLSELADSSCVEVFPNGDVDPTPLGKI
MSYYYLSHKTIRHLVRKARASATFLEALSWMSRASEYDELPVRHNEDLINAELAKALPFP
TSAFDGLPMWDPHVKAFLLLQAHMARVEPLPITDYVGDQTSVLDQAVRIIQASVDVMTEL
GHLSSMLQFVKLLQCVKQARWPEGPALSIFPGFDNAEADKCKSKMTLAQLSKSTNSRGAN
NNQYQALQTLARSELHLPPAQASRFAKAAQAVPDIHVSVENVKHGELTVILKRLNPITER
EGRIYAPKFPKPQTEGWFVVVADLAKDEVVAVKRVGWSSGQQRRNRQDQAQNEGNKKKTN
GIEVGMRPSARAVMRLPPMEGGGQMKGSRKLDVLVVSDGYIGMEYRVEGVEVPGPPAPEG
VDEDLEKKPGKGGAKREQEGGGKWGESSK
NT seq
6210 nt
NT seq
+upstream
nt +downstream
nt
atggccgccggtccctccatcaacggcggtttagacattgcagcatggcgtgcccaaatc
gaaaccatgaaggcagccgtagcgggcttacctccatccgccagtgaagccggcggcagc
tctaccaacagcgactgggacgacgacgagatcgactcatcaacctactccccaaccaga
aacggagacggtcccagagacatttgggatttcatctcggatgacgagctggactctatc
gagttcgctgatggtggcgattattaccatgatcatgagactgacggagctgaagatggg
tttgccggtggtagtggtagtggttccggctacggcttcggctggctcgcctcacgatgc
gcagacgtcagatctgcgtctggtctgggtgccggggcgctgcaggaccagatcatggag
attctggggtcggggaaatcggaggatgagctgcagtcttcgctgacggatctcattggg
tttgatgatcttgacttcgtcattgacctcatttcgcaccgggaggaactggtgtcgtcg
gttggacgggcgttgaagcagcagcaacagcagcaacaacagcaacaacagcaacatcaa
caacaggaacaaggtaacgggcccgacgggctgcgcctactcagcaaggcgcaacgacag
gcggctctacagcagcgagactacgagcacaaatccacccccttggccgccgcgagatca
aaggaggaggaatatccgcatgtgtaccgggcgtacagcgcgggcaacacgctgagccat
tcgggcaagcggtatgctttgccccctggaagcgagaggaaggagcatgagaagtatgag
gagtacacgattcccgccggaaagacagggaccctgggtgctggaagaaagctggtcaac
attgcggatatggatggcttgtgcagaaacacgtttagggggtacaagacgctcaacagg
atgcagagtctggtgtatccggtggcgtataagacgagtgagaatatgcttatctgcgct
cctactggtgctggtaaaactgatgctgccatgttgaccatcctccacacggttggccag
tacttgacaccaagtcccttcgaggaccatgtcactaccgacttcgctgttgccgcagag
gatttcaagatcgtctacgtcgctcccatgaaggccctggcggccgaaatcacggagaag
ctcggtaaacggttggcttggttgggcattcgctgccgtgagtttacgggtgacatgcat
ctcacaaagtcggaaattgttcaaacccaaataatcgtcaccacccctgaaaaatgggat
gtcgtgacgagaaagggcaccggagacacggagctcgtgcaaaaggttcgcttgctcatc
atcgatgaggtgcacatgcttcacgacgagagaggtgccgttctggagtccttggtggcg
agaacggcgcgtcaggtcgaaagtacacagtctctcattcgcatcgttgggttgagtgcc
acgctccccaactacgtcgatgttgcggacttcttgaacgtcaacaagtacgccggcctc
ttctactttgacgcctccttcagaccagttccgcttgagcagcacttcattggagtcaag
ggcaagccgaattccaagcaatccagggagaacctggaccaggtggccttcgagaaggtc
agggagatgctcgagtgcgaccaccaagtcatggtcttcgttcactcgagaaaggacacg
caagccacggccaagatgctcttcgaaaaggctacggacgaggcttgcaccgaccttttc
gatcctagctaccatgagaagtacgaggctgccatgagggatgctagagggaccaaggct
cgggagattcgcgaactcatccctaagggcctgggcattcaccatgctggcatggctcgc
tcagacaggaacctcatggagcgactgtttgccgagggtgtcatcaaggtcctctgctgt
acggccaccctggcttggggtgtcaacttgcccgctgccgccgtcgttatcaagggtact
caggtgtacagtgcccaggatggtaagtttgtggacttgggtattctcgacgttctgcag
atcttcggtcgtgccggtcgtcctcagtttgaggacactggtattggcatgatttgcacg
acgcatgacaagcttgcacactacctcactgcgatcacggatcagctccctattgagtcc
aggttctcggccaagctggtcgataacttgaatgctgagattgctctgggcactgtcact
tcgattccggaggcagtcaagtggatcagttattcgtacctcttcgtacgcatgaagcgg
aacccaatggcctacggtatcgattggtccgaatatgacaatgaccgctcgctggtccag
agaagacgccaactggcgatccaggctgccaggacactacagcagagccaaatgatcatc
ttcaacgaggcgaccgaagaactccgtagcaaggatatcggtcgcatcgccagtcagttt
tacatccagcactccagtgtccagatcttcaactccatgatgcggcctttctccactgag
gaagatatcctgaagatgattgccatgagcggcgaattcgacaacatccagtccaggaac
gaggaagcgaatgagcttatggcgatgaagcacgacgagagattcgtgccctacaaagtc
agcacgggtattgatcagccgcatacaaagaccaatatcttgcttcaggcctatatctcc
agggcgcaaccgcaagattttgccctgacaaacgacctcaactatgttgctcagcaagct
ggtcgtatctgcagagccctgttcatgattgctctgaaccgccgctggggtcaccagtgt
ctggtgctgttgaccatggcaaagtccatcgagaagcgcatctgggcttttcaacatcct
ttccaccagtttgaccgcgatctccccaagccggtgctcaacaagctcgacgagctggag
gccctcaacatagagtcaatgagggaaatggaaccggctgagattggtagcttggttaac
aaccatcgtatgggcgggaagatcactaagctgcttgacaacttccctactctcagcgtc
gaggcggagattgcgccattgaatagagatgtgttaaggatcaagctctacgttactccc
gacttccgctggaacgaccatctgcatggaacttccgagtcgtactacatctgggtcgag
aactcggagacgtcagagatctaccaccacgaatacttcattctgaacaggaggaagctt
cacgatgaccatgaactcaacttcaccattcccctgtccgatccgatgccgaaccagatc
tacgtgagggcggtctcggaccggtggctgggcgctgagactgtaacggctgtgtccttc
cagcacctcatccgccctgacacggaaagtgtctacaccgatctgctgaacctgcaacct
ctgcccgtctcggcgttgaagaaccccgccctggaagagatctacgcccagcgcttccag
tacttcaacccgatgcagacccaggtcttccacactctgtaccatactcccgccaatgtt
cttttgggctcgccgacgggcagtggcaagacggttgcttgcgagctggccatgtggtgg
gcattccgtgagcgaccgggttccaaggtggtctacattgcgcccatgaaggcgctcgtc
cgcgagcgtgtcaaggattggggcgcccgtctcgccaagccactcggtctgaagctggtc
gaattgacgggcgacaacacgcctgacacgcgcacaatccaggatgcagatatcattatc
accacgcctgagaagtgggacggtatctcacgtagttggcagacgagaggatacgttcgc
aaggtcagcttggtcatcattgatgagatccacttgcttgctggcgaccgtggtcctatt
ctcgagatcattgtgtctcgtatgaattacattgcgtcgtcgaccaaaaactcggttcgc
ttacttggtatgtcgacggcttgtgctaatgcgacggatctggcgaactggcttggtgtg
aaggagggtctgttcaacttccgccactcggtgcgtcctgtgccactggagttgtatatc
gatgggttccccgaggtcagagggttctgtcccctgatgcagtcgatgaatcgtcctacg
ttcttggcgattttgaaccacagccctgagaaaccagtcattgtgttcgtgccgtctcgt
cggcagacccgcttgacagccaaggatctcatcaacttctgtggtctggaggataaccct
cgacggttcctccacatggatgaggacgatctccaacttaacctctcgcgcgtcaaggac
gatgcactgaaggaagccatcagcttcggcatcggtctccatcatgctggtttggtagag
tctgacaggcagatcgccgaagagctctttttgaacaacaagatccagattctcgttgca
acgagtaccctagcttggggtgtcaacctccccgcccatcttgtcgtcgtcaagggcacg
caattctacgacgcgaagatcgaagcctacaaggacatggacttgacagacgtgctccaa
atgctcggtagagcaggacgccctcaattcgacaactctggcgtagcccgcatcttcacc
caagattccaagaaggatttctacaagcactttttgcacaccggcttccccgtcgagtcc
tctctgcacacggtcctcgacaaccatctgtgcgccgaagtctcggccgagactatcgtc
accaagcaagacgcgctcgactacctgacctggaccttcttcttccggcgtctgcacaag
aacccgtcctactacggtctcgagattagtgcggaagaacactcgtccaccatggcccag
cagctcgccaacgactacatgatccagatggtcgaccactcgctctccgagctcgccgat
tcttcttgcgtcgaagtcttccccaacggcgacgtcgacccgaccccgctaggcaaaatc
atgtcctactactacctttcccataagaccatccgacacttggtccgcaaagcccgcgcc
tccgccactttcctggaagctctatcatggatgtctcgcgcctccgagtacgacgagctc
cccgtccgtcacaacgaagacctgataaacgcggaactagccaaggccttacccttcccc
acctctgccttcgacggcttgccgatgtgggatccccacgtgaaggcattcctcttgctg
caagcgcatatggcccgcgtcgaaccgctgcctatcaccgattacgtcggcgaccagacc
agtgtgctcgaccaagcagtgcgtatcatccaagcctccgtggacgtgatgacggagcta
ggccacctttcaagcatgctccagttcgtcaagctcctgcaatgcgtcaaacaagcccgt
tggcccgaaggcccggccttgtccatattccctggattcgataacgccgaagcagacaag
tgcaagagcaagatgacactcgcccaactgagcaaatccaccaactcccgcggcgccaac
aacaaccagtaccaagctctccaaaccctcgcgcgctccgaacttcacttgcctcccgcg
caggctagccgcttcgccaaagccgcgcaggcagtgccggatattcacgtctcagtcgaa
aacgtcaagcacggcgaactaaccgtcatcttgaagagacttaaccccatcaccgagcgc
gaagggaggatttacgcgcccaagttccccaagccgcaaacagaagggtggttcgtcgtc
gttgccgatttggctaaagacgaggtggtggctgtgaagagggtcggatggtcttctggg
caacaacgaagaaatcgacaggatcaagcccaaaatgaggggaataagaagaagacgaat
gggatagaagtgggcatgagacctagtgctagggctgttatgagactgccgcctatggaa
gggggtgggcaaatgaagggcagcaggaagctggatgtgttggtggttagtgatgggtat
attgggatggagtatagggttgagggggtggaggtgccgggaccgccggcgccggagggg
gttgatgaggatttggagaagaagcccgggaagggcggtgctaagagagagcaggagggt
ggtgggaagtggggggagagttctaagtag
DBGET
integrated database retrieval system
