Sordaria macrospora: 10807652
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Entry
10807652 CDS
T01610
Symbol
SMAC4_01036
Name
(RefSeq) uncharacterized protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
smp
Sordaria macrospora
Pathway
smp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
10807652 (SMAC4_01036)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smp03019
]
10807652 (SMAC4_01036)
Enzymes [BR:
smp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
10807652 (SMAC4_01036)
Messenger RNA biogenesis [BR:
smp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
10807652 (SMAC4_01036)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_18
AAA_16
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
10807652
NCBI-ProteinID:
XP_003350145
UniProt:
F7VNT4
LinkDB
All DBs
Position
3:join(4094841..4094876,4095047..4095944,4096017..4096283,4096369..4096631)
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AA seq
487 aa
AA seq
DB search
MSIPGLGQIAPQAPTSTQRTINLRPFGEWRFSIPHQHSTFSSNSSAAGVTVRLVAGTAER
DGTELTPHKDYTFLPGTKSKLFTDQGCTLEINNTGGYPLEDRVVEYPHPEQSPMVSYINL
HFGLEDYERAAAAHHAQHPLPHQQQGRQGGGGPRPKPGPRVLVCGPHCVGKTSLVKYLGA
LATRMGSQPLVANLNPTDGLLSLPGTLSAAVFGTLMDVEEPAGGFGVSSTPISGPSQTVK
NPLAFYFGREKAGEDVETWKQMTERLAVLCKRKLERNRDVRVAGFLVDTAPVDAGDKEGQ
ELLAWGVRQFDVNYVVVIGSEKLKTELGQRFASEKTSFGEPVTVLGFDKSDGAVQIDKGW
RQKSTETAIKEYFFGGIKARLSPFTQSASFDELVVFKAPDDPYEGAPVLERVEITPEMAH
WTLAVMIASVTDSPQAIRFSSVLGFIVIADVDVERRRVKFLSPVSGRLGNHPLIWGRWPE
PYLNLLA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattcctggccttggtcaaatagccccacaggctcccacatctactcagcgaacc
atcaacctccgaccgtttggcgaatggcgcttctccatcccccaccaacacagcaccttc
tcctcgaactcctccgccgccggcgtcacagtccgcctagtagccggcaccgctgaacgc
gacggcaccgaactcacgcctcacaaggactacacgttcctcccgggtaccaaatcgaag
ctcttcacagaccaaggatgcaccctcgagatcaacaacacgggcggctaccccctcgaa
gaccgcgtggtcgaatacccgcacccggaacaatcgcccatggttagctatatcaacctt
catttcggcttagaagactacgagcgcgccgcggccgcccatcacgcacaacacccacta
ccacaccaacaacaagggaggcaaggaggaggaggaccaaggccgaaacctggaccaaga
gtgctagtctgcggtccccactgcgtcggcaagacctccctagtcaaatatctcggcgcc
ctcgctacgcgcatgggctcccagccgctggtggccaatctgaaccccaccgacggcctg
ctgtctctgccggggacgttgagcgcggccgtgttcggcacgctgatggacgtggaggag
ccggcgggcgggtttggcgtgtcgagcacgccgattagcgggcccagtcagactgttaag
aacccacttgccttttattttgggcgtgagaaggccggggaggacgtggagacgtggaag
cagatgacggagcggctggcggtgttgtgtaagcgcaagcttgagaggaatcgggatgtc
agggtggccggattcttggttgatacggcccccgttgatgcgggagataaggagggacag
gagttgttggcgtggggggttaggcagtttgatgtcaactacgtcgttgtgatcggctct
gaaaagctaaagacagaactcgggcaacggtttgccagcgaaaagacgagctttggagag
ccggtcactgttctcggtttcgacaagtcggacggcgctgtgcaaattgacaagggatgg
aggcaaaaatcgacagagacggcgatcaaagagtacttctttggtggcatcaaggcgcga
ctgagcccttttacacaatcggccagcttcgacgaactggtcgttttcaaggcgcccgat
gacccctacgaaggcgccccagttctcgagcgtgttgaaatcacccccgaaatggcccac
tggacactagcagtcatgatcgcctctgtgaccgactcgccgcaggccatccgcttttct
tccgtgttgggcttcatcgtcatcgctgacgtggacgtggagcgccggcgtgtcaagttc
ctgtcgcccgtcagcggtcgtctgggtaaccacccgctcatctggggacgctggccggaa
ccgtatctcaacttgctggcgtag
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