KEGG   Sordaria macrospora: 10807832
Entry
10807832          CDS       T01610                                 
Symbol
SMAC4_00869
Name
(RefSeq) uncharacterized protein
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
smp  Sordaria macrospora
Pathway
smp03018  RNA degradation
smp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:smp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    10807832 (SMAC4_00869)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    10807832 (SMAC4_00869)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smp03019]
    10807832 (SMAC4_00869)
   03041 Spliceosome [BR:smp03041]
    10807832 (SMAC4_00869)
Messenger RNA biogenesis [BR:smp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     10807832 (SMAC4_00869)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     10807832 (SMAC4_00869)
Spliceosome [BR:smp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    10807832 (SMAC4_00869)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 10807832
NCBI-ProteinID: XP_003349977
UniProt: F7VNB1
LinkDB
Position
3:complement(join(3453143..3453340,3453445..3453495,3453645..3453785,3453871..3453873))
AA seq 130 aa
MLPLGILTAAQGHPMLVELKNGETLNGHLIQCDTWMNLTLREVVQTSPEGDKFARLPEVY
VKGNNIKYLRVPDDVIDIAREQQHNSHGGHRGGRGGGQNRGDYGGRGGRGGRGGGDRGGQ
RGGRGRGRGA
NT seq 393 nt   +upstreamnt  +downstreamnt
atgctaccgttaggcatcctcaccgcggcgcaaggccaccccatgctcgtcgagctcaag
aacggcgaaactctcaacggccacttgatccaatgcgacacgtggatgaacctgacacta
agggaggttgttcagaccagcccggaaggtgacaagttcgcaaggttaccagaggtttac
gtcaagggaaacaatatcaaatacctccgagtaccggacgacgtgatcgacatcgctcgc
gagcagcaacacaactcacacggcggacatagaggcggtcgcggcggcggacagaacaga
ggcgactacggtggccgtggcggccgtggcggacgaggaggaggcgacagaggtggtcag
agaggaggccgcggccgtggcaggggcgcatga

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