Sordaria macrospora: 10807954
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Entry
10807954 CDS
T01610
Symbol
SMAC4_02114
Name
(RefSeq) uncharacterized protein
KO
K10841
DNA excision repair protein ERCC-6
Organism
smp
Sordaria macrospora
Pathway
smp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
10807954 (SMAC4_02114)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smp03036
]
10807954 (SMAC4_02114)
03400 DNA repair and recombination proteins [BR:
smp03400
]
10807954 (SMAC4_02114)
Chromosome and associated proteins [BR:
smp03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
10807954 (SMAC4_02114)
DNA repair and recombination proteins [BR:
smp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
10807954 (SMAC4_02114)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
10807954
NCBI-ProteinID:
XP_003350402
UniProt:
F7W105
LinkDB
All DBs
Position
4:complement(join(4323448..4325690,4325748..4327023))
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AA seq
1172 aa
AA seq
DB search
MEPDTTQNSGPTQTSPETKPDVEQPEAMSLDNGNSTVNTPSALETDGLDEEAALKNLTKN
VRDQDDLERDITLQASRALIEAEDKRDQKRIDKAEATRARLDNQKKTQQQKLRPGITNPT
ARLRIQREIARIDAEIELCDKDIADFRARIEQRNQQGETDTLAPATGKRLPNETQREYLI
RTGKITPFAKFGGPRPAEVEGDLANAIVDAEDEAVAEELEEKEDDGPRSHQNLRLPGFAE
ENEVATVAAADEFSLRPRKRRRVQPPPESEDEFVPGESGSEAVSPEADAFDDYDDYDMTD
TTPKKRKKAAREADGDDKVDLSGIDDGNEKVYQARLKDWVARRSNARRARQQRIGQPVDK
DDRVEEWFKPSPDQPDHQFENGLKLPGDIYPSLFDYQKTGVQWLAELYAQQVGGIVGDEM
GLGKTVQLISFVAALHYSRKLDKPVIVVAPATVLRQWVNEFHRWWPPLRVSILHSSGSGM
LNVRNEGELDDREDDYGKRKPKKSSQAAKRIVERVVKHGHVLVTTYAGLQTYGDVLIPVD
WGYAVLDEGHKIRNPNTAITIYCKELRTPNRVILSGTPMQNNLTELWSLFDFIYPMRLGT
LVAFRNQFEIPIKLGGYANATNLQIMTAQKCAETLKETISPYLLQRLKVDVAADLPKKSE
QVLFCKLSKPQREAYELFLKSDDMTAILNRTRQSLYGIDILRKICNHPDLLDPRLKDDPS
YQWGSTNKSGKMAVVKSLLPMWKRLGHKTLLFCQGTQMLDIIEAFVRRQDGINYLRMDGK
TPVKDRQTLVDQFNNNPDLHIFLLTTKVGGLGTNLTGANRVIIFDPDWNPSTDVQARERA
WRLGQKKEVTIYRLMTAGTIEEKIYHRQIFKQFLSNKVLKDPKQQTSFNLNDLHDLFSLS
SYEDGKTETAELFKGSEVRRLPSGPKEIVLPGNDVPALRAPGVTKPVEIKDEATSEDETG
GLRHIEGVAGLETFKDDGPAPAPNEEDRLMEGIFARSVHSALEHDEIMNGRKPKVKADRR
ILQAEADRVAAQAALALRRAGEEARNVPIGTVTWTGEYGEAGRPALRRERGGPTSAGVRG
AASGAAPSRAQRPATPSDNRNLRAEDFERMIPAFIKRHGGKVPSKSLVDHFNHYCTGARQ
ADMFKVALEKVAKLEKKGSSMRGIWTVRPEYQ
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggaacctgatacaactcaaaactcgggaccaacccaaacctcgcccgagacaaagccc
gatgtcgaacagccagaagcaatgtcactcgacaatggaaactcgacagttaacacgccg
agtgcgctcgaaactgacgggcttgacgaagaggctgcgctcaagaatcttaccaaaaac
gttcgagaccaagacgatctggaacgtgatattaccctacaagctagtcgagctttgatc
gaagccgaagacaagagagatcagaagcgcatcgacaaggctgaggctactcgtgcgaga
ctcgacaatcagaagaaaacacagcaacagaaactacgaccgggcatcacgaacccaacc
gcacgactacgcatacaacgagagatagcacgaatcgatgccgaaatcgaactttgcgac
aaagacattgccgatttccgtgctcgcatcgaacagcgcaaccagcagggcgagaccgat
accctggccccggccaccggcaaaagactccctaacgagacccagcgagaatatctcatc
cgaacgggaaagatcacgccgtttgccaaattcggtggacccagacctgccgaagttgag
ggtgatctcgccaacgccattgtcgatgcggaagacgaggctgtcgccgaagaactggaa
gaaaaggaagatgacggccctcgatctcatcagaatctgcgtctccctggctttgccgaa
gaaaatgaggtcgctactgtagctgctgcagacgaattttccctgcgtccccgaaagagg
cgtagggtccaaccgccgcccgaatcagaagacgagtttgtgccgggagagtctggttcc
gaagcggtatctcccgaggccgatgccttcgacgattacgacgattatgacatgacagac
accacacccaagaagcggaagaaggcagctagagaggctgatggtgatgacaaggttgac
ctgagcggtatcgatgatggtaacgaaaaagtctatcaagcaagactaaaagactgggta
gcgcgcaggagcaatgcacgacgggctcgtcagcagagaatcggccagccagttgacaag
gatgacagggtggaagaatggttcaagccatcaccggaccagcctgaccaccagtttgag
aatggtctcaagctgccaggcgatatttacccatctctttttgactaccagaagaccggc
gtacagtggctagcagagctatacgctcagcaagttggaggtatagttggagacgagatg
gggctgggcaaaactgtgcaactgatttcgttcgtggctgcgttacactacagtcgaaag
cttgacaagcccgtcattgttgtagccccggcaacagtcttgcgtcaatgggtaaacgaa
tttcaccgctggtggccaccacttcgagtatctatcctccactcctctggcagtggcatg
ctcaatgtccgcaacgaaggggagcttgacgacagagaggatgactacggcaagagaaag
ccgaaaaagtccagccaggctgcaaagaggatcgtcgaacgcgttgtcaagcatggtcat
gtgctggtcacaacttatgccggcttgcagacgtacggcgatgtcttgatcccggttgac
tggggctatgccgtactggatgaaggacataaaatccgaaacccaaacacagcaatcacc
atttactgcaaggaacttcggacacctaaccgcgtgattctttccggcacgccgatgcag
aacaacttgacagagctatggtcactctttgatttcatctaccccatgcggctcggtact
ttggtcgccttccgaaatcagtttgagatcccaatcaaactcggcggttatgccaacgca
accaaccttcagatcatgactgctcagaaatgtgcagagacgttgaaagagaccatcagc
ccttacctacttcagcggctgaaagtagacgtggccgctgatctacccaagaaaagcgaa
caggtcctattttgcaagctgtccaagccccagcgggaggcttacgaactcttcctcaag
tcggatgacatgactgccattctcaacaggactcgccaatccctctacggtatcgatatc
ttgcgtaaaatctgtaatcatccggatctgctcgatccgcggctcaaagatgatccttca
taccaatggggcagtaccaacaagtcagggaaaatggcagtcgtcaagtcattactcccg
atgtggaagcgtcttggccataaaacgttgctgttttgccagggcacgcaaatgctggac
attatcgaggcgtttgtaaggcgtcaggatggtatcaactacctgcgtatggatggcaag
acgcccgtcaaagaccgacagacgcttgttgaccagttcaacaataatccggacttacat
atcttccttctaaccaccaaagtgggcggtctcggcactaatctgacaggagctaaccgg
gtcatcatcttcgaccccgactggaacccatcaacagatgtccaggccagagaacgtgcc
tggcggttgggacagaagaaggaagtcactatataccggcttatgacagctggaaccatt
gaagagaagatctatcaccgccagatcttcaagcagttcctgtccaacaaggtattgaag
gatccaaagcagcagacctcttttaatctaaacgacctccatgacctattcagtctcagc
tcatacgaggacgggaagaccgagacagcagagctgttcaagggcagtgaagtcagacgc
ctgccttcaggacccaaagagatagtgttgcccggtaacgacgtgccagctctcagggcc
cctggagtaaccaaacccgtagaaatcaaggacgaagccacaagcgaggacgagacaggc
ggcctccgtcacattgaaggagtcgcagggctggagacattcaaggacgatggaccagct
cctgcaccgaatgaagaagaccgcctgatggagggtatctttgcacgttcagttcacagc
gcccttgagcacgacgaaatcatgaacggtagaaagccaaaggttaaagcggatcgccga
attctccaggcggaagcagacagagttgctgctcaagcggccttggctctccgtcgtgca
ggtgaggaagccagaaacgtgcccatcggcacggtcacctggacgggcgagtacggcgaa
gctggtcgtccggcgctccgtcgcgaacgcggaggtcccacctcagcaggtgttcgcggt
gcagcaagcggtgcagccccgtcgagagcgcagagaccggcaacgccgtcagataatagg
aacctgagggcggaggactttgaaaggatgattccggcgttcattaaacggcatggcggc
aaagtcccatccaaatcgctcgttgatcactttaaccactattgcacgggagcgagacag
gcggatatgttcaaggttgctttggagaaagtggccaagttggagaagaaggggtcgagc
atgcggggcatttggacggttcgtccggagtatcagtga
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integrated database retrieval system
