Sordaria macrospora: 10807980
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Entry
10807980 CDS
T01610
Symbol
SMAC4_02141
Name
(RefSeq) uncharacterized protein
KO
K12874
intron-binding protein aquarius
Organism
smp
Sordaria macrospora
Pathway
smp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
10807980 (SMAC4_02141)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smp03041
]
10807980 (SMAC4_02141)
Spliceosome [BR:
smp03041
]
Complex B
Other components
Prp19-related factors
10807980 (SMAC4_02141)
Complex C
10807980 (SMAC4_02141)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
Aquarius_N_3rd
AAA_12
AAA_11
ResIII
AAA_19
AAA_30
Viral_helicase1
AAA_16
AAA
AAA_22
DEAD
NB-ARC
DnaB_C
UvrD_C_2
nSTAND3
SLFN-g3_helicase
UvrD-helicase
ATPase_2
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
10807980
NCBI-ProteinID:
XP_065946948
LinkDB
All DBs
Position
4:complement(join(4211590..4212089,4212167..4215631,4215707..4215807,4215870..4216141))
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AA seq
1445 aa
AA seq
DB search
MPPAKRVKSSANADKGPAAGSGRPTTQDLEGDSEFANLARQHWLKTTKRADEVKVKVKND
VLKSEIWDALEKDGFPLKSLLVLEGLQTLESYLWPGYGEDSSNYHVLLIVLIVNAKRRER
LDAWGLFNDRPTDFSDLFRRALSMTLDDSLSWSIRTQVLQFIIYAFESLDCTIVRKECAP
LVSISIWHNLSTEEKRNELLDSNTHLRKAWRASAKRYDVADDAGKARLRFERAWLYSSVL
EFFRVLYNPTAKQDQVMYCEHFLELLIDVLSQLPTRRYVNTLLQDLHILPALHLSPMYND
EGNGLLRDLTKLLSHFVYFMVDDQTGVQYSKTEAYDQHCARLAKLQRTSLKHFKDKLTVL
ALSNYGSIDKRSDLFGLLDVLTDEELTELSRLLGMRISYPGSSTLVVDRRFLMEVLLSTF
ERHKTFQEEAAELSVLPTEETLFETGLGRTDYYDGSRPLALPKVNLQYLTVGDFLWRSLT
LYRCEAFYAIRQDVEAALTRLKPEARRTGETVFTGFSRMALPIGKPTVLDVVPPLVGTDV
PSTVKAEVTIDLRKLTEHVRRDWDALRPDDVLFLVEVNASKAKKVENGGAPLSEAERLGL
VTVRTAEVIQIMDDRGRAVRDAQAYFENHNRSYTRKIQVRLDAHAYKRDSEGKRNVYEGI
NLIVRRSGRENNFKPVLESIRDLALSEVPLAPWMHEVFLGYGDPAGATYKNLPNRIKKLD
YRDTFLDWEHLIECLPGKNVEPSEDVSGTINPPFILETVEKPAEEGTSKPSKKRRRDAEP
ALISEIETVKVSTYKPPNNGPYPIDAPKLNSVRFTPKQVEAIISGSQPGLTVVVGPPGTG
KTDVATQIINNIYHNFPEQKTLLIAHSNQALNQLFAKIVALEIDERHLLRLGHGEEDLET
EGSFSKHGRVESFLENRDRYLLEVNRLAASIGAPGAHGNSAETAGYFNKVYVQPAWAKFS
DIAKAEDATPEDIVKAFPFHYYFADAPQPLFPPDADVDTVREIANGCYRHISKIFTELAD
VMPFEILRRDRDKENYLLTNEARIIAMTSTHAAMRRGKIAALDFHYDNVVMEEAAQITEI
ENFIPFAMQKPKDGKAPLQRIVLCGDHYQNSPVIQSLAFRHYVNLEQSLFSRLVRLGVPT
INLDLQGRARPSISGLYKWRYPSLNDLPHTMTATEFLTANAGFKYEYQFIDVPDYKGQGE
SEPTPHFIQNLGEAEYAVAIFMYMRLLGYPAEKISILATYAGQRALIKDVLGHRCAKNPI
FGLPRIVTTVDKYQGEQNDYIILSLTRTSRVGYLRDIRRLTVALSRARLGLYILGRRSVF
ESCYELREAFELLLQRPDKLTLVTGELWPSQRVLADEVGKEGLEGETAMEGVEHLGQYVF
EMTKTRIEQLKEEGKQLPAPTEEGEGQVEVVAADGEDGAEVVELAMPDEEEVEAVRAEGF
EAEED
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atgccgccggcgaaacgagtaaaaagcagcgcgaatgcagacaaagggccagccgccggc
tcgggacggcccaccacccaggacttggaaggagacagcgagtttgccaaccttgcgcgc
caacattggctgaagacaacgaaacgcgccgacgaggtcaaggtcaaggtcaagaacgat
gtgctcaagagcgagatctgggacgccctagagaaggatggcttccctctcaaatccctg
ttggtgctggaaggtctacagacactggagagctacctctggcccggttacggtgaagat
tcgtccaattaccatgtcctcctgattgttctgatagtcaatgccaagcgcagggaaaga
ctggacgcatggggcctcttcaatgaccgcccaactgacttctccgacctcttccgccgc
gccctgtccatgaccctcgacgactcgctatcttggagcatcaggacccaagtcctccag
tttatcatatacgcctttgagagcttggactgcaccattgtccggaaggaatgcgcaccc
ctggtctcgatatcgatctggcacaatctgtccaccgaagagaagcgcaacgagctgctg
gattcgaacacacacctgaggaaagcctggagggcatccgccaagcgatatgatgtggcg
gatgatgcaggaaaagcccgcttgcgattcgagagggcatggctgtacagctccgtcctg
gaattcttcagggttctttataacccaaccgccaaacaagaccaggttatgtactgcgag
catttcctcgagctcctgatagatgtcctcagccagctcccaacaagacgctacgtcaac
accctgctccaagacctccatatcttgccggctctgcacctatcaccaatgtacaacgat
gaaggaaacggtctgttgcgggatctcaccaagctcctctcgcacttcgtgtactttatg
gtggatgaccagacaggagttcagtatagcaagaccgaggcgtacgatcagcattgcgcc
aggctcgcaaagctacaaaggacatccttgaaacacttcaaagacaagctgacagtgctt
gctttgtccaattacggctccatcgacaagagatctgacctttttgggctgctggatgtc
ttgaccgacgaagagctcaccgagttgtctcggttactaggaatgcgaatcagctaccca
ggatcttcgaccttagtggtggaccggaggttcttgatggaggtgctattgtcaacattc
gagcgtcacaagaccttccaagaagaggcggctgagctgagtgttcttcccacggaagag
acgctctttgagactggtctgggaaggaccgattactatgatggttcgcgacctttggcg
ctgccaaaagtgaatctgcagtatctcacagtaggagacttcctttggcggtcgctgacc
ctatatcgttgcgaggcattctatgctatccgacaagatgtcgaggcagccttgacaagg
ctaaaacctgaggctcggcgcaccggtgaaactgtattcacgggtttctcaaggatggct
ttgccaatcggcaagccaacagtacttgatgtcgtcccgccgcttgtcggtactgatgtc
ccttcgactgtaaaggctgaagtaaccatcgacttgcgtaaactgacagagcatgttcgc
cgtgactgggacgctcttcggcccgatgacgtgttgttcctggtcgaagtaaatgcttcc
aaggcaaagaaggttgaaaacggcggggcacctcttagcgaggccgaaagactggggttg
gtgactgtccggacggcagaggtgatccagataatggatgacagaggtcgagcggtccgc
gatgctcaagcatactttgagaaccacaatcggagctacacaagaaagatccaggttcgt
ttggatgctcatgcctacaagcgggactcggagggtaagcggaacgtatatgagggaatc
aaccttatcgtccgtcgaagcggtcgtgagaacaacttcaagccggtcttggagtcgatc
cgtgacctcgccctctccgaagtacctctcgctccatggatgcatgaggtattcctggga
tatggtgatccagctggggcaacatacaagaaccttcccaacaggataaagaagttggac
taccgcgatacattcctagactgggagcatttgatcgagtgtttgcccggcaagaatgtt
gagcccagcgaggatgtatctggaaccatcaacccccctttcatcctcgagactgttgag
aaaccggccgaggagggaacctccaagccttccaagaagaggaggcgggatgccgagcct
gctctcatatccgagatagagacagtgaaggtttcgacttacaagcctccaaacaacggg
ccatatcccatcgatgcgcccaaactcaactccgtccggttcacccccaagcaggtagaa
gccatcatctctggctctcaacctggcctcacggttgttgtcggccctcctggaacaggc
aagaccgatgttgccacccagatcatcaacaacatataccacaacttccctgaacagaag
actctgctcatagcacacagcaaccaggctctgaaccagctcttcgccaagattgtagcg
ttggaaattgatgagcgtcatcttctacgtctaggacatggtgaggaggacttggaaacc
gagggcagcttcagcaagcacggacgagtggaatccttccttgagaaccgtgatcggtat
ctccttgaagtcaatcgcctcgctgccagcataggagcacctggtgcccacggaaactcg
gccgagacagcaggctatttcaataaggtctatgtccaacccgcatgggccaagttcagc
gacattgcgaaggctgaagacgcaacccctgaggacatcgtcaaggcattccctttccac
tactactttgccgacgcgccccagcctttgttccctcctgatgccgatgtcgacactgtc
cgggagattgccaacggctgttatcgccacatctccaagatcttcaccgagcttgctgat
gttatgccctttgaaatcctccgccgggatcgcgataaggaaaactacctcctgaccaac
gaagcccgcatcatcgccatgacctccacccacgctgccatgcgccgtggtaagattgcc
gctctggacttccactacgacaacgtggtcatggaagaagccgctcagatcaccgaaatc
gagaacttcatccccttcgccatgcagaagcccaaggacggcaaggccccgctccaacgc
attgtcctctgcggcgaccactatcagaactcccccgttatccagtctctcgccttccgc
cactacgtcaatcttgagcagtccctcttctcccgcctcgtgcgcctcggcgtgcccacc
atcaacctcgacctccagggccgcgccaggccctccatctcgggtctctacaagtggcgt
tacccatcgctcaacgatctgccgcacaccatgacggctaccgagttcctcactgccaac
gccggtttcaaatacgagtaccagttcatcgacgtccctgactacaagggccagggtgag
agcgagccgacgccgcactttatccagaacttgggcgaggcagagtacgcagtggccatc
ttcatgtacatgcgtttgttgggctaccccgcagagaaaatcagcatcctcgctacttac
gccggacagagggcgttgatcaaggatgtgttgggtcaccgttgcgcgaagaaccccatc
ttcggattgcccaggatcgtcacgacggtggacaagtaccagggcgagcagaatgattac
atcatcctctccctaacccgcacgtcccgcgtcggctacctccgcgacatccgccgccta
accgtcgccctctcccgcgcccgtctcggtctgtacattctcggccgccgctccgtcttc
gagtcgtgctacgagctccgcgaagccttcgagctgctcctccagcgcccggacaagttg
accctcgtcaccggcgagctgtggccttcgcagcgtgtgctggctgatgaggttggcaag
gaaggactcgagggagagacggccatggagggcgtggagcatctgggacagtacgtgttt
gagatgaccaagaccaggatcgaacagttgaaggaggaagggaagcaattgcctgctcct
actgaggagggcgagggacaggtggaggtagtggctgcggacggggaggatggtgctgag
gttgtggagttggcgatgccggatgaggaggaggtcgaggctgttagagctgaagggttt
gaggctgaggaggattga
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integrated database retrieval system
