Sordaria macrospora: 10808193
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Entry
10808193 CDS
T01610
Symbol
SMAC4_02300
Name
(RefSeq) uncharacterized protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
smp
Sordaria macrospora
Pathway
smp04138
Autophagy - yeast
smp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
10808193 (SMAC4_02300)
04148 Efferocytosis
10808193 (SMAC4_02300)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smp04131
]
10808193 (SMAC4_02300)
Membrane trafficking [BR:
smp04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
10808193 (SMAC4_02300)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
10808193
NCBI-ProteinID:
XP_003350628
UniProt:
F7VP62
LinkDB
All DBs
Position
5:join(2585234..2587944,2588016..2588769)
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AA seq
1154 aa
AA seq
DB search
MLSAFTARPIIELKQRDKSKIESILAYGDRVLVGLNTGSLRIYRVNELPPAAPPPPSSSQ
SANGTSSQQSSEATESTTTQDQNGSSTTQDYHQNTGPGFLNAQAAPIGPKPTDLLREVEK
FSTRAIEQLAIIKEANTIISLSNYNGVALHDLQTFEPIEFPTARTKSASTFAVTSNIVKD
PDTGIPEIISRLAVAVKRRLLLWSWHESELSPDVTEIVLSEAIRSLTWANANKVVCGMNG
GYQIVDVTTGHMEDIVGPGAIGAAGGQSRFGATASMGYMGLGNFTPKPLSAKLAEGQLLL
AKDINTLFINDAGKALEKRQIPWQAAPESIGYSYPYILALQSPTKGSLEVRNPDTLNLLQ
TISLPGAASLHFPPPTVSLAHAGKGFHVLSERVVWKMDATDYDSQIDELVKTQRYDEAIS
ILAMLEDALLKNKTETMREVKMLKAELLFRQRKFRESMDLFNEDEVHAPPERVLRLFPKI
IVGELGVDEKKPEEPQEDSDNEGAPNGKANGDQASKEDEPHFEVSSPQKGSGFAKYLMGH
GRKKFDPETSSIVSSRRGPVDDDAASIRSKAAEDQRAQDEKDLMTAVSELNSYLAGARAR
LQRVIDPATGKLKPRKSSNGATEEAFKTLLMSHKDEDDEQLEKDLQETFRVVDTTLFRAF
MYSRPTLASSLFRIPNFCDPQVVNERLVEHNRFNELVDFFYGKKLHRQALDLLRKFGSPD
EPDEAAPTLHGPQRTVLYLQGLPPELIDIILEFSEWTLRKDPRLGMEVFLADSENAETLP
RARVLHFLGGIDTALEIQYLEHIISELNDMTPEFHNRLVELFIRQLREEKKPGEEEEWDS
LMERLVQFLKDSRQYSLGRAFSLIPRDDSRFYEARAVVLSNMGQHKQALEIYVFQMKDYK
KAEEYCNRIHKSSEHPLPTSPSHPPGTTNITSPSTSTEDPSQDEAHPSIYHTLLSLYLTP
PSPHKPNLPPALDLLSKHGSRLPATSTLSLIPDDLPVSELEGYFRGRMRNANSIVNETLV
VAGLRKTGLVTSQALLLLGDGLPRGAAGLSGGNTRVGGRNRRVVIGEERVCGVCHKRLGG
SVVAVLPGGEDAVVHYGCLGRSQHGKGLGTGTGIAGVGVGGEVMSPGGGMTTTGSVKSGV
SGGTTTQYGAWGRG
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgctctccgcatttacggctcgacccatcatcgagctcaagcagagagacaaatccaag
atcgagtctatcctcgcctacggtgatcgcgtccttgtcgggttgaatacgggatcactc
aggatataccgtgtaaacgagcttccacctgctgcccctccaccaccatcatcgagccag
tccgcgaacggaacatcgtcccaacagtcgagcgaagccaccgaatcgacgactacccaa
gaccaaaatggatcttcaacgactcaagactaccaccagaataccgggccaggctttcta
aatgcccaagccgcgccgataggacccaagcccaccgacctccttcgcgaggtagaaaag
ttctcgacgcgcgctatcgaacaactcgccataatcaaggaagccaacaccataatatct
ctgtccaactacaacggtgttgctcttcacgacctccagaccttcgaaccgatcgagttt
cccacagcccgaaccaagagcgcttccaccttcgccgtcacaagcaatattgtcaaggat
cctgacaccggaatacccgagattatatcgcgtctggctgttgctgtaaagcgccgcttg
ctgttgtggtcatggcacgagagcgagctctcccccgatgtcaccgaaatagtcctttcc
gaggcaatccggtccctcacatgggccaacgcgaacaaggtggtctgcggcatgaacggt
ggctaccaaatagtcgatgttacaaccggtcatatggaggatattgttggtcccggggct
atcggggcggcgggaggacagagtcgctttggtgctacagccagtatgggatacatgggg
ctgggcaactttacacccaagcctctatcagcaaagctcgccgagggccagctattgctc
gccaaagatatcaacacgttatttatcaatgacgccgggaaggcgttggagaagcgccag
attccctggcaagccgctcctgaaagcattggatatagttacccttatatccttgccttg
caatcaccgaccaagggcagtctggaagtacgaaatccggacacattgaaccttctccag
actatcagtctaccaggggccgcttctctgcatttcccaccacctacggtcagcctggcg
catgccggaaaaggcttccatgtcctgagcgagagagtggtgtggaagatggatgccacg
gactacgactcccagatcgacgagctggtaaagacccagaggtatgatgaagccattagc
atcttggccatgttggaggatgcgcttctcaaaaacaaaaccgagactatgcgcgaagtg
aaaatgcttaaggccgaactgctcttccgccaaaggaaattccgcgagtcaatggatctg
ttcaatgaagacgaggtccatgctccacccgagagggtactaaggctcttccccaagatt
attgttggagagctgggtgtcgacgagaagaagcctgaagagccgcaggaagactcagac
aatgaaggggcccctaatggcaaggcaaatggagatcaggcgtccaaggaggatgagccg
cattttgaagtatcgtcgccacaaaaaggcagtgggtttgccaagtacctcatgggtcac
ggtcgcaagaagtttgatccagagacatcatcgattgtctcctccagaaggggcccagtc
gatgatgacgcggctagcatcaggagcaaggcagccgaggaccaacgcgctcaagatgaa
aaggatcttatgacagccgtctcagagctgaacagctacttggctggagcaagagcgaga
cttcagagagttatcgatccagccaccggaaagctgaagccgcgcaagtcctcgaacgga
gccacggaggaagctttcaagacactactaatgtctcataaggatgaggatgacgaacaa
cttgaaaaagatctccaggaaactttcagagtcgttgacaccactctcttccgcgcattt
atgtattcccgtccgacgttggccagctcccttttcagaatccccaacttctgcgaccca
caggtggttaacgagaggctcgtagagcacaatcggttcaacgagctggtagacttcttt
tacggcaagaagctacatcgtcaggcactcgatttgcttcgcaagtttggctcgccggac
gagcctgacgaggcggcgcctaccttgcatggtcctcaaaggacggtcctctatcttcaa
ggtctgccgcccgagctgatcgacatcattcttgaattttccgagtggacgttgaggaaa
gaccccaggctaggaatggaggtcttccttgccgactcggagaatgcagagactcttcca
agagcgcgggtcctccactttttgggtggcatcgacacggccttggagatccaatacctg
gaacatatcatctccgagctgaatgatatgacgcctgagtttcacaaccgccttgtcgag
ttgtttattagacagctcagggaggagaagaaaccaggtgaggaggaagaatgggactcg
ctcatggagcggttggttcagttcttgaaggacagtcggcagtacagcctcggaagagcc
ttcagtctcattcctcgagacgactcacgtttctacgaagcccgagccgttgtcctcagt
aacatgggtcaacacaaacaagccctggagatctacgtcttccaaatgaaagactacaag
aaagcagaagaatactgcaaccgcatccacaaatcctccgaacaccctctccctacctcc
ccctctcacccacccgggacaaccaacatcacctcgccctccacctccaccgaagaccct
tcccaggacgaagcccacccttccatctaccacaccctcctctccctctacctgacccct
ccctcccctcacaaacccaacctgcctccggccctcgacctcttgtccaaacacggctcc
cgcctgcccgccacctccaccctctctctgatcccagacgacctgcccgtctccgagctc
gagggctactttcgcgggcgcatgcgcaacgccaacagcatcgtcaatgaaaccctcgtc
gtcgccggactacgcaaaacgggactggtcacgagccaggctctgctgttgctgggcgat
gggttaccaaggggagcggcggggttgtcgggtggaaataccagggtgggaggaaggaat
agacgggtggtgattggggaggagagagtctgtggggtttgtcataaacgacttggtgga
agcgtggtggcggtgttgcccggtggggaggatgcggttgttcattatgggtgtttgggg
aggtcacaacatggaaagggcttggggacggggacgggaattgccggtgtcggtgtcggt
ggggaggtgatgagtccgggtggtgggatgacgacaacggggagtgtgaagagtggtgtg
agcggggggacgacgacgcagtatggggcttgggggagggggtag
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