Sordaria macrospora: 10808231
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Entry
10808231 CDS
T01610
Symbol
SMAC4_02339
Name
(RefSeq) uncharacterized protein
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
smp
Sordaria macrospora
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smp03009
]
10808231 (SMAC4_02339)
04121 Ubiquitin system [BR:
smp04121
]
10808231 (SMAC4_02339)
Ribosome biogenesis [BR:
smp03009
]
Eukaryotic type
90S particles
Other 90S particles
10808231 (SMAC4_02339)
Ubiquitin system [BR:
smp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
10808231 (SMAC4_02339)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Sof1
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_DCAF12
WDR90_beta-prop_4th
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_IFT140_2nd
Beta-prop_NUP159_NUP214
eIF2A
NBCH_WD40
Cytochrom_D1
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
10808231
NCBI-ProteinID:
XP_003350668
UniProt:
F7VPA4
LinkDB
All DBs
Position
5:complement(join(2733630..2733929,2733986..2735017,2735098..2735103))
Genome browser
AA seq
445 aa
AA seq
DB search
MKIKALSRNISAQQAPGNDVTRAPRNLAPELHPFERAREYKRALNAVKLERVFAKPFLGQ
LGNGHVQGVYSMAKDKNSLSTIASGAGDGIVKVWDLTTRDEAWKVAAHNNIVKGMTFTND
KKLLTCATDGIKLWDPYTKSDTPTPLATWQEGGPYTALSFHRTANSFVASSGAGCIRVWD
LEHSTAPQTIQWPNHTDTITDVCFNQVETSIVGSVGTDRSVILFDLRTNMPVIKTVLKFA
ANRIVFNPMEAMNMAVASEDHNIYLFDARNFTKAQNIQKGHVAAVMDVEFSPTGEELVSG
SYDRTIRVWRRDQGMSRDVYHTKRMQRVFRTTWTMDSKYLLSGSDDGNIRLWRANASERS
GVKATKQRQALEYNKTLVERYSHMPEIKRISRHRHLPKVVKKAAEIKREELAAIKRREEN
ERKHTVKQFEKRKAEREKAILAKLE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaaagccctcagccgaaacatctcggcccaacaggcccccggtaacgacgtc
acccgcgcacctcgcaaccttgcgcccgaactccatcccttcgagcgcgctcgcgagtac
aagagagccctcaatgccgtcaagttggagagagtcttcgccaagccgttcctcggccag
ctaggaaatggccacgttcagggtgtctacagcatggccaaggacaagaactcgctatct
accatcgcttccggtgctggcgacggtatcgtcaaggtctgggatctcacaacacgggac
gaagcatggaaggtcgccgcccacaacaacatcgtcaagggaatgaccttcaccaacgac
aagaagctcctcacatgcgccaccgacggcatcaagctttgggacccttataccaagtcc
gacactcctaccccacttgcgacatggcaagaaggcggaccatacacggccctctcgttc
caccgcaccgccaactccttcgtcgcctcctcgggtgccggctgcattcgcgtttgggat
ctggagcacagcacggctcctcagacaatacagtggccgaatcacaccgacaccatcacc
gacgtttgcttcaaccaggttgagacctctatcgttggttccgtcggcaccgatcgctcc
gttattctcttcgatttgcgcaccaacatgcccgtcatcaagaccgttctcaagttcgcc
gccaaccgcattgtcttcaaccccatggaggccatgaacatggccgttgcctcggaagat
cacaacatctaccttttcgacgccaggaacttcaccaaggcccaaaacattcagaagggt
cacgttgcggcggttatggatgtcgagttctcccccaccggtgaggagctcgtgtctggt
tcgtacgatcgcacaatcagggtgtggcgtcgcgaccagggcatgtctcgcgacgtttac
cacaccaagcgtatgcagagggtgttccggacgacctggactatggattccaagtacctt
ctcagcggcagtgacgacggtaacatccgcttgtggcgtgcgaatgcctccgagcgcagc
ggtgtcaaggcgaccaagcagagacaggcgctcgagtacaacaagaccttggtcgagagg
tattcgcacatgcccgagatcaagcgtatctcccgccacagacacttgcccaaggtggtc
aagaaggcggccgagatcaagcgcgaggagcttgcggccatcaagaggagggaggagaac
gagaggaaacacaccgtcaagcagttcgagaagcgcaaggccgagagagagaaggccatc
ctggccaagctggagtaa
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