Sordaria macrospora: 10808276
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Entry
10808276 CDS
T01610
Symbol
SMAC4_02385
Name
(RefSeq) uncharacterized protein
KO
K24155
rabconnectin-3a
Organism
smp
Sordaria macrospora
Pathway
smp04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
10808276 (SMAC4_02385)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smp04131
]
10808276 (SMAC4_02385)
Membrane trafficking [BR:
smp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
10808276 (SMAC4_02385)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
10808276 (SMAC4_02385)
RAVE complex
10808276 (SMAC4_02385)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_THOC3
Beta-prop_WDR5
Motif
Other DBs
NCBI-GeneID:
10808276
NCBI-ProteinID:
XP_003350713
UniProt:
F7VPE9
LinkDB
All DBs
Position
5:join(2932153..2932233,2932306..2932494,2932577..2935342,2935415..2935912,2935979..2936207,2936275..2936564)
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AA seq
1350 aa
AA seq
DB search
MKAVLPGKPESRLQALATGYWDSRRITAYITGSAIAILGEQKTILQTIYDDNEEPLEAIA
LDEASGKIAVCTYNAVRIYKPFGQEDDALRWALQCSFHVERDDQYVAEERTSISLSWGAS
EELVVAHSHLELYQTTSSTPRCLWRKRLANPVRIASVSYDSAYIASVGQYDRLVTVWRRL
SYGSDDVRFDFLYLPHPQAVTNIQWRRPRHIDQTIDNVLYTFCTDNRLRLWTGSDGHSHQ
HLQLNAAVDLAVSIQDRTLEDSAVSPLRWAFILHGRDLSAATEKAVQEAPPKEDTTALEH
VIAVANRSPEVVVVLDGRGRMSAWGLENVGSRSQKCNIFNVAHISSPEFDFLKGVTTDVP
HVEAYSYCNTGIHLRILLHFFDGTVEVYRTNVASLFDPTPRTKRLSFRCLWTGHSAPIKK
IVRNYSGRAIVSRTDSGQSIVWKHELNDERTRLSQQAVINLDSHVHRMCLIRKGRFVLYL
RQQTISLWDCRKTNPVLLSEIDYDVPGKPLCLIILPRQHVEDYTTAHVATITSEKQGVVW
EVKLPFYKPQENVPAVNGSGYHQEGTVREFTKFELKDAGDLAYVLPVDPAGSSPVVSGFL
DVFARDVAISYTHSGRVDFWTARVDQEKQHVEWLSTSSMETGLSSPTLVSGNSIKKAALV
NSTRSELTIWGVRGGRLEFSQDFENHNTIRDLDWTSTPDGQSILAVGFPYRVLLLSQMRF
DYLNKGPAWAPIREISTRILTPHPIGDSTWLGDGHLVIGAGNQFFVYDRHFDVSSSLITS
LRLPHRKGGKWDLFEVVQRLNGPLPVFHPQFLSQCILSGKIALVHRVLLALHKTLKFWVE
GEMIDDYLGLSLEDFWSGEYTDNQPRKQRNDHGDYFSGDRRMSLDDGDDEVFSEEVAMKI
GEKLTQIGLPQLSGHEQIQLVDIVECVGLVEKQRRSLDENGARFMLFYRQHALRKRRTNE
NHMSWREIAWAYHSGSQDILLDFVSRQHHGPMLWEDAREAGIFMWLTDTTAVKTQFEIIA
RNEYTKSEMKNPVDCSLFYLALKKKTVLQGLWRMASWNREQGATQRFLANNFDDPKWRTA
ALKNAYALMSKRRFAYAAAFFLLADHLQDAVNVCLNQLKDLQLAIAITRVYEGDHGPVLR
KLLEEEVLTIAAKDGNRWLASWAFWMLHRRDMAVRALITPVYTLLETPGSSDLQSKSFLT
DDPALIVLYAQLRQKTLQTLRGASKVTPKVEWEFVLHNARLYDRMGCDLLGLDLVRNWEF
LKPAPAVPAELGGEINPLTLLKRRSSLVVADMPVLSHSVSSPVVEKAMSFQVPAEMKSGH
GTPSTPHKPKPPPTVFEEPDANSLLDSFGF
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctgtcctgcccggaaagccagaatcccggcttcaagctctggcaacgggctac
tgggattctcgtcgcataactgcatacatcaccggcagcgccattgccatcctcggagaa
caaaagaccatcctacagaccatatacgatgacaacgaggagcctctagaggctatcgcc
ctggatgaggcctcgggcaagatagccgtctgcacatataacgccgtgcgcatatacaaa
ccgttcggtcaggaggacgacgctcttaggtgggcgttacaatgttccttccacgtcgag
cgggatgatcagtatgtggctgaagagagaacgtccatctctctctcctggggcgcatcc
gaagaactggtagtcgcacattcgcatctcgagttataccaaacaacgtcatctacacct
cgatgtctctggcgcaaacgcctcgccaaccccgttcggattgctagcgtgtcatatgat
tccgcatatatcgcctccgtgggccagtacgaccgcttggtgacagtctggcgacgactc
agctacgggtccgacgatgtgcgcttcgattttctctacctaccgcacccccaggccgtg
accaacatccagtggcgccggcctcgtcacattgatcagaccatcgacaatgtcctttac
accttttgcactgataatagactccggctctggacaggctcggatggccatagccaccaa
catcttcaactcaatgcagcggtagacctggctgtgtcgatacaagatcgcacactagag
gactcagctgtatctcccctccgctgggctttcatactgcatggtagagatctgtctgcg
gcgacagaaaaggccgttcaggaagctccgccaaaggaagatacgacagcccttgagcac
gtcattgcggtggctaatcggagccccgaggtcgttgtcgtgttggatggtcgaggccgt
atgtcagcttggggcctcgagaacgttggatcaaggtcacaaaagtgtaacatcttcaac
gtggctcatatctcttcaccagaattcgactttttgaagggcgtcacaacagacgtgcct
cacgtcgaggcatacagttactgcaatactgggatccaccttcgtatcttgctacacttc
tttgacggcacggtagaggtttaccgcaccaacgtcgcttcactgtttgacccaactccg
cggacgaagcggttgagcttcagatgcctgtggactggtcactctgctcctatcaagaag
atcgtccgaaactatagcggtcgggccattgtgtcacggacagactcgggccaaagtatc
gtctggaaacatgagctcaacgatgagaggactaggctttctcaacaggcggtcatcaac
ctcgatagccatgtccatcgaatgtgtctcatccgtaaaggtcgatttgtcctgtacctt
cgacaacaaactatctccctctgggattgtcgcaagacgaatcctgtgttgctatcagaa
atagactacgacgttccaggcaagccgctctgtctgatcatccttccaaggcagcatgta
gaagactacacaaccgctcatgttgctaccataacatcggagaagcaaggtgttgtttgg
gaagtcaagctgcctttttataagccacaggaaaatgttcccgctgtgaacggcagtggg
taccaccaagaaggtacagttcgagagttcaccaagtttgaactcaaggatgctggtgat
ttggcatatgtccttcccgtggatcctgccggctcttcgcctgtggtgtctgggttcctt
gacgtcttcgctcgtgatgtcgccatctcctacacacactcaggaagagttgatttctgg
acggccagggtagaccaagaaaagcaacacgtagagtggctttctacgagctccatggag
acggggctatccagcccgacacttgtcagcggcaacagcataaaaaaggcagccctagtc
aattcgacccgatcagaactcacgatttggggtgttcggggcggccgtcttgagttctca
caggactttgagaaccataataccatccgtgacctcgactggacttcaaccccagatggc
cagtctattctagccgtagggtttccctatcgggtgctgctcctttcacagatgcgtttt
gattacctcaacaagggacctgcctgggcgcctatcagggaaatcagcacccgtatcctc
actccccatcctatcggcgattccacctggctaggcgatggacatcttgtcatcggtgct
ggcaatcagttctttgtgtacgacagacactttgatgtgtcaagttcactcatcacgagc
ctgagactgccccatcgcaagggtgggaagtgggatttgttcgaggtagtgcagcgattg
aacggcccattaccggtgttccatccgcaattcttgagtcagtgtattctttctggcaag
atcgccttggtccatcgggttttgctggctctccacaagacgctcaagttctgggtggaa
ggtgagatgattgacgattacctgggcctttctcttgaggatttttggtccggcgagtat
acggacaaccagccacggaaacagaggaacgatcatggggactacttctccggtgaccgc
cgcatgtcgctcgacgacggggacgatgaagttttcagcgaagaggtggcgatgaaaatt
ggcgagaaactgacccagattggcctgccgcagctttcgggccatgaacagattcaacta
gtcgatattgtggaatgtgtgggactagttgagaaacaaaggaggtcactcgatgagaat
ggcgccaggttcatgcttttctatcgacaacatgcgctgcggaagaggaggacaaatgag
aaccatatgtcgtggagggagattgcatgggcataccattcgggtagtcaggatatcctg
ctggacttcgtttcaagacaacaccatggcccgatgctgtgggaggatgccagggaagcc
ggtatatttatgtggttgactgatactactgctgtgaaaacccagttcgagatcatcgct
cgtaatgaatacaccaagagcgaaatgaagaacccggtagactgtagtttgttctatctg
gcactcaagaagaaaacggttctccaaggcttatggcgaatggcttcttggaaccgtgag
caaggcgcaacccaacggttcctggccaacaacttcgatgatcccaagtggcggacggct
gctttgaagaatgcctatgcgctcatgagcaagaggcgatttgcgtatgctgctgcgttc
ttcttgttggccgaccatctacaggacgccgtcaatgtctgcttgaaccagctcaaggat
ttgcaactagccatcgcgataacgagggtatatgaaggggaccatgggccagtcttgcga
aagctgctcgaggaggaagtccttaccattgcggcgaaggatggtaacagatggctcgct
agttgggcgttctggatgttgcataggcgggatatggcggttagggcgttgataacgcct
gtatacacgcttctggaaacacccgggtcttccgatctccagtcgaagtcattcctaaca
gacgacccagcgttgattgtcctctacgctcagttaagacagaaaacactccagacgctc
cgcggggcatccaaagtcacgccaaaggttgagtgggaatttgttttacacaatgctcga
ctgtacgatcgcatgggatgtgatctactcggtcttgatctcgtccgaaactgggaattc
ctcaaaccagcacccgccgttccggccgaacttggaggcgagatcaacccccttacactg
ctcaagcgcagaagctctttggtggtggcggatatgcctgtcctctcacattctgtctcg
tcaccagtggttgaaaaagcgatgtcgttccaggtgccggcggaaatgaaatcgggacac
ggaacaccgtcgacaccgcataagcctaaaccgccgccgacggtgttcgaggagcctgat
gcaaattcgctgttggatagctttgggttttag
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