Sordaria macrospora: 10808509
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Entry
10808509 CDS
T01610
Symbol
SMAC4_04242
Name
(RefSeq) uncharacterized protein
KO
K03012
DNA-directed RNA polymerase II subunit RPB4
Organism
smp
Sordaria macrospora
Pathway
smp03020
RNA polymerase
smp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
10808509 (SMAC4_04242)
09124 Replication and repair
03420 Nucleotide excision repair
10808509 (SMAC4_04242)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smp03021
]
10808509 (SMAC4_04242)
03400 DNA repair and recombination proteins [BR:
smp03400
]
10808509 (SMAC4_04242)
Transcription machinery [BR:
smp03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
10808509 (SMAC4_04242)
DNA repair and recombination proteins [BR:
smp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
10808509 (SMAC4_04242)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
DUF6036
DUF2489
Motif
Other DBs
NCBI-GeneID:
10808509
NCBI-ProteinID:
XP_003350938
UniProt:
F7W1A0
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All DBs
Position
1:complement(join(3633184..3633305,3633421..3633739))
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AA seq
146 aa
AA seq
DB search
MSDQHHAPTSRSKPPPPGEEEASAVLKLGEFNDVDTLTLSEASLVINALMTKRRKDRKDR
NETDVLNKTLDYLDAFARFKQKENVEAVERLLSARKELTKFERAQIGSLCCDSADECKTL
IPSLADKIDDENLQELLDEMAKLMST
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaccaacaccacgcccccacctcgcgttccaagcctcccccgcccggcgaggag
gaggcttcggcggtgctcaagctgggcgagttcaacgacgtggacacgctcacgttgtcg
gaggcctcgctcgtcatcaacgcgctcatgactaagcgtcgcaaggaccgcaaggaccgc
aacgagacggacgtgctcaacaagacgctcgactacctggacgcgtttgctcggttcaag
cagaaggagaacgtcgaggctgtggagcgcttgttgagcgcgcgtaaggagctgaccaag
tttgagagggcgcagattggatcactctgttgcgatagtgccgacgagtgcaagacgctg
atcccctcgctggcggacaagattgatgacgagaacctacaagaattgctggacgagatg
gccaaactcatgagcacctag
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