KEGG   Sordaria macrospora: 10808509
Entry
10808509          CDS       T01610                                 
Symbol
SMAC4_04242
Name
(RefSeq) uncharacterized protein
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
smp  Sordaria macrospora
Pathway
smp03020  RNA polymerase
smp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:smp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    10808509 (SMAC4_04242)
  09124 Replication and repair
   03420 Nucleotide excision repair
    10808509 (SMAC4_04242)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smp03021]
    10808509 (SMAC4_04242)
   03400 DNA repair and recombination proteins [BR:smp03400]
    10808509 (SMAC4_04242)
Transcription machinery [BR:smp03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     10808509 (SMAC4_04242)
DNA repair and recombination proteins [BR:smp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      10808509 (SMAC4_04242)
SSDB
Motif
Pfam: RNA_pol_Rpb4 DUF6036 DUF2489
Other DBs
NCBI-GeneID: 10808509
NCBI-ProteinID: XP_003350938
UniProt: F7W1A0
LinkDB
Position
1:complement(join(3633184..3633305,3633421..3633739))
AA seq 146 aa
MSDQHHAPTSRSKPPPPGEEEASAVLKLGEFNDVDTLTLSEASLVINALMTKRRKDRKDR
NETDVLNKTLDYLDAFARFKQKENVEAVERLLSARKELTKFERAQIGSLCCDSADECKTL
IPSLADKIDDENLQELLDEMAKLMST
NT seq 441 nt   +upstreamnt  +downstreamnt
atgtcggaccaacaccacgcccccacctcgcgttccaagcctcccccgcccggcgaggag
gaggcttcggcggtgctcaagctgggcgagttcaacgacgtggacacgctcacgttgtcg
gaggcctcgctcgtcatcaacgcgctcatgactaagcgtcgcaaggaccgcaaggaccgc
aacgagacggacgtgctcaacaagacgctcgactacctggacgcgtttgctcggttcaag
cagaaggagaacgtcgaggctgtggagcgcttgttgagcgcgcgtaaggagctgaccaag
tttgagagggcgcagattggatcactctgttgcgatagtgccgacgagtgcaagacgctg
atcccctcgctggcggacaagattgatgacgagaacctacaagaattgctggacgagatg
gccaaactcatgagcacctag

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