Sordaria macrospora: 10808778
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Entry
10808778 CDS
T01610
Symbol
SMAC4_03497
Name
(RefSeq) uncharacterized protein
KO
K14289
exportin-5
Organism
smp
Sordaria macrospora
Pathway
smp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
10808778 (SMAC4_03497)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smp03016
]
10808778 (SMAC4_03497)
03036 Chromosome and associated proteins [BR:
smp03036
]
10808778 (SMAC4_03497)
Transfer RNA biogenesis [BR:
smp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
10808778 (SMAC4_03497)
Chromosome and associated proteins [BR:
smp03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
10808778 (SMAC4_03497)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Epimerase_2
Motif
Other DBs
NCBI-GeneID:
10808778
NCBI-ProteinID:
XP_065947515
LinkDB
All DBs
Position
6:join(2457589..2458440,2458543..2458731,2458805..2459270,2459323..2459444,2459501..2459572,2459638..2459862,2459933..2460036,2460093..2460351,2460412..2461159,2461211..2462001)
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AA seq
1275 aa
AA seq
DB search
MDTDGAAGAGADPVIARIHEALNIVHSPYSPNQARQEAQAFLEEVKTRGDAPSHGFSLAS
GGSQEPVVRHYGLSLLEYAVKHKWSEYDTNQREFLRSWILQLAQGVAKPDPPFLRTKMAQ
LWVEIAKRCWGADWMDMDELLNRLWQVPNSPVHKEFVLLILEILSEEIFNGEDAIVAHRE
GALSKACVEIFTPSAVLSEGFPGRQHEPQVRFGDDGWISRVTGLVRDCLNENLDSNEDIR
ACVVKALAVLNSVMPWAIPKAIHATGCRPVICSGLASSNVTVQRAALEALHSLYSRSSFT
SEEFADLVVPMYSPELVDLCRRLFEWSTVDAEDIDDDKYQFAKKFSEMISCVGNYLDRKY
AFIPPQVDIQDFLKLLIEVVQSQSLVVSIPILVTWTRLLNHRSLGPAIGKTDMVLPLLDG
TSARLLRYENLPEDTEDPTFVLLMEDTDTIPERHAFLGNYRRYSCSIIESIVQLRLTDAF
QYILSQAENALQTLYEGQPPLNPATYSKNSMPVLRVDAHATVIEAALKGYVKWRGRQGEL
PGGEEEVSSIETHLEQWCSRLLEMNIEDPLIRKRILQLLVAFSTTALDTKANFMLRVLEH
ILMTWPALQPEHKTFNDAIRDLQTESMVELQRLASKMPDHLLDVYDQLESKVKEMIASGT
LDEKRQIAYRSFLFIIIHRATRIDQETRIRRLAEFVEPVKTQWKEAPLQQALGSFEGFCQ
LIGLDKAQNYIAQRRVHQVGDWGAVELDAEGLALQAELEQRQTFLPLRSTKSFLTYSVEK
LEKNSPAYQASCTLWQDGFPIILPELLKFLSYAHACHDPKNWSLLPEEMRPVVSRLLTDR
FWQAGISEGSKDDFYARVLDKKNTLEGLASTIRGTVRFVREACYAVIYCMSRLDVQFYGF
MELPGPLANALFADSFSLSSHQLINLLNLVRYLVDHCPVELRDHFLPPILASCFQQMDAK
ISSEWDKLGQKQTVQVADNEELTEEMKAESILRQLTYTAAIMVAEFLDPARTGPPSNLPA
SPNGTTAESRYPSLRRFCLMQTSIAGPLLLFLCHAIHMRDTRCCGVVLRVFRSIVPEFQI
QSHPKEQKDPSHPSLPDENFPIPDATKAEIHQFLGTDVMRAAISSMNDPYFVDSQKDLAT
LIATILAHYCVSDEVSGGNPASRQILCSLPGIKEQEVDRTLTFLRRPGTHSRQQRAVVLD
LLRNVKSVSISEMGKLKDPREEVVRKAPKRSKMAQKFMTPQQGADTSATGTEQGAGRRQA
TPDLTGVAGMFDEGH
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggataccgacggggccgccggtgccggcgccgaccccgttatcgcgaggattcacgaa
gccctcaacattgtccacagcccctactctcccaaccaggcaagacaagaagcccaggca
tttctggaagaagtcaagacgcgcggtgacgcaccctcgcatgggttcagccttgcttcc
ggtggttcacaagaacctgtcgttcgccactacggcctgtctctactcgaatatgcggtc
aagcacaaatggtctgaatatgacaccaaccaacgcgagtttctccgcagttggatcttg
caactggcacagggtgtcgcgaaacccgaccctccctttctccgaacaaagatggcccag
ctctgggtcgagatagctaaacgctgctggggtgcggattggatggatatggacgagttg
ctgaaccgcctatggcaggttccgaactcgcccgtacacaaggagttcgtcctcctgatc
ctcgaaatcttgtccgaggaaatcttcaatggagaagatgccatcgttgcccacagagag
ggagcactgagcaaggcatgcgttgagatcttcacaccttctgccgtgctcagcgaaggc
ttcccaggccgtcaacacgaaccccaggtgcgattcggtgacgacggatggatcagtaga
gtaacaggactcgtccgagactgtttgaacgagaacctcgacagtaatgaggacatccgg
gcttgtgtcgtcaaagctttggctgttctcaactccgtgatgccgtgggcaattccaaaa
gccattcatgctaccggttgccgtcctgttatatgcagtggccttgccagctcaaacgtg
accgtgcaaagggctgctttggaggcattgcattctctctattcccggtcgtcattcacc
agcgaagaattcgccgacctggttgttcccatgtacagccccgagttggtcgacctttgc
aggcgactatttgaatggtcgacagtggacgctgaggacattgacgacgacaagtatcag
tttgccaagaaattctccgagatgatctcgtgcgtagggaattacctggaccggaagtac
gctttcataccgccccaggttgacatccaggacttcctgaagcttctgatagaggtggtg
cagagccagagtctcgttgtttccattcccatcctagtgacttggacgcgccttctcaat
caccgctcgctcggtccggctattggaaaaaccgacatggttctaccgctgttggacggc
actagcgctcgactgttgcgctatgagaacctccctgaagatacggaagaccctacgttt
gttcttctcatggaggataccgataccatcccggagagacatgctttcctcggtaactat
aggcgatatagttgctctatcatcgagagcatcgtccagctgaggctcacggatgccttc
cagtacatcttgagccaggcagagaatgctttgcaaactctgtatgagggccagccacct
cttaacccggctacctattccaaaaactccatgcctgttctaagagtagacgcccatgcc
acggtcattgaagcagctctcaaaggctacgttaagtggaggggaagacagggagaactt
cctggaggggaggaagaagtttcaagtatcgagacacatctcgagcagtggtgtagcagg
ctgctggagatgaatattgaggaccctcttatccgcaaacgtattcttcagctgcttgtc
gccttctccacgacggctcttgacaccaaggccaactttatgttgagggtgctcgagcac
attctcatgacatggcctgcattgcagcccgagcacaagaccttcaatgatgcgatcagg
gatctccaaaccgaaagcatggttgaattgcagaggctcgcctccaagatgcccgatcat
ttactggacgtctatgaccagcttgagtccaaggtcaaggagatgattgcctctggaaca
ctcgacgaaaagcgccaaattgcgtatcgcagtttcctcttcatcatcatccaccgggca
acccgcatagaccaggaaacgcggatcaggcgtcttgctgaattcgtcgagccggtcaaa
acccagtggaaggaagccccgttgcaacaagcactcggctcattcgagggattctgccag
ctcatcggtttagacaaggcgcaaaactacatcgcccagcgtcgtgttcaccaagttggt
gactggggtgctgtagagcttgatgccgaaggattggcgctgcaagccgaacttgaacag
agacaaacgttccttcctttacgctcaaccaagtcattcttgacctattcagttgaaaaa
ctggagaaaaactcccctgcctatcaagcgtcttgcaccctgtggcaggatgggttcccg
atcatcttgcctgagctgctcaagttcctgagctacgcacatgcgtgccatgatccgaag
aactggtctttgcttccagaagagatgcgacccgtcgtcagccgtctcctgactgaccgt
ttctggcaagccggtatttctgaaggcagcaaagacgacttctatgcgcgtgtcctagac
aagaagaacacgcttgaggggcttgcctccaccatccgtggcaccgtgcgttttgtccgc
gaggcatgttatgccgtcatctactgcatgagccgacttgatgtgcagttttacgggttc
atggaacttcctggtcccttggcaaacgccctgtttgccgattcgttcagcctctcgtct
catcagcttatcaatctgttgaacctggtgaggtatcttgttgatcactgtcctgtggag
ctacgggatcattttctacctccaatcctggcctcgtgcttccagcagatggatgccaag
atcagcagtgaatgggacaaactgggccagaagcagaccgtgcaggtggctgataatgag
gaactaacggaagagatgaaggcggaaagcattctccggcagctaacgtataccgcagcc
attatggtggccgaattccttgacccggcgaggactggaccacctagcaatcttccggcc
tctcccaacggcaccactgcggagtcccggtatccatcgcttcggagattctgcctcatg
caaacgtcgatcgccggccctctcctcctattcctttgccatgcgattcacatgcgtgat
accaggtgctgtggtgtcgtcctccgtgtgttccgatccatcgtgccggagttccagatc
cagagccaccctaaagagcaaaaggacccgtctcatccttctctgcccgatgagaacttc
cccattcccgatgctaccaaggcagaaattcaccagttcctcggaaccgacgtgatgaga
gccgcgatctcctcgatgaacgatccttattttgtcgactctcaaaaggaccttgcaacc
ctgatcgcaacgatccttgcccattattgcgttagcgatgaagtctcgggaggcaatcct
gcgtcccgccaaatcctgtgctcactaccgggtatcaaggaacaggaagtggataggacc
cttactttcctgagacgtcctggcacacattcacgccaacaacgtgctgtggtcctggat
ctactgaggaacgtgaagagcgtcagcatcagcgagatgggaaagctgaaggacccaaga
gaagaagttgtcagaaaggctcccaagaggagtaagatggcccagaagtttatgacgcct
cagcagggcgccgacactagtgcgactggtactgaacagggagctggcaggaggcaagcg
actcctgatcttacaggagtcgccgggatgttcgatgagggacactga
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integrated database retrieval system