Sordaria macrospora: 10808942
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Entry
10808942 CDS
T01610
Symbol
SMAC4_03669
Name
(RefSeq) uncharacterized protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
smp
Sordaria macrospora
Pathway
smp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
10808942 (SMAC4_03669)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smp03400
]
10808942 (SMAC4_03669)
DNA repair and recombination proteins [BR:
smp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
10808942 (SMAC4_03669)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_I
MutS_IV
AAA_22
AAA_27
Motif
Other DBs
NCBI-GeneID:
10808942
NCBI-ProteinID:
XP_003351363
UniProt:
F7VVU6
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All DBs
Position
6:complement(join(3114378..3117158,3117230..3117253))
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AA seq
934 aa
AA seq
DB search
MSSRPELKVDDEHGFIRFYKSLPQLGEEAIRIFDRGDWYTAHGDDATFIARTVYKTTSVI
RQLGRSDHTGLPSVTMTVTVFRQFLREALFKLGKRIEIWASPSGRMNWKIVKQASPGNLQ
DVEDELGGQFEGAPVILAVKISAKASEARAVGVCFADASVRELGVSEFLDNDLYSNFEAL
LIQLGVKECIITQDKGEKEKDPELAKLRQIIDNCGVAVSERPAGEFGIKDIEQDLSRLLK
DERAATLLPQTDLKLAMGSAAALIKYLGVLHDSSNFGQYQLYQHDLAQFMKLDAAALKAL
NLMPGARDGAKNMSLYGLLNHCKTPVGSRLLSQWLKQPLMNAEEIEKRQQLVEAFANDTE
LRQTMQEEHLRSIPDLYRLSKRFQRGKATLEDVVRAYQVVIRVPGFIGTLEGVMDEAYRD
PLDEVYTNKLRELSDSLVKLQEMVETTVDLDALDNHEFIIKPEFDDSLRIIRKKLDRLRT
DMDNEFADAADDLGQEREKKIFLENHKVHGWCMRLTRTEAGCIRNNSRYLECSTQKNGVY
FTTKTLQTLRREFDQLSQNYNRTQSSLVNEVVGVASSYCPVLERLAAVLAHLDVIVSFAH
CSVHAPTSYVRPKIHPRGTGRTVLTEARHPCMEVQDDVTFITNDVTLSREDSSFLIITGP
NMGGKSTYIRQIGVIALMAQIGCFVPCSSAELTIFDSILARVGASDSQLKGVSTFMAEML
ETANILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGCFALFATHFHELTAL
ADQYPNVKNLHVTAHISGTDADTDADSEKEKKKREVTLLYKVSPGVCDQSFGIHVAELVR
FPEKVVRMAKRKADELEDFTSKHDEENGGGLGVQYSKQDVEEGSALLKDVLVKWKDEVKS
GQMSKEEMVGRLKELVQKDGRLVGNPFFKSVLAL
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccagaccagagctcaaggtcgatgacgaacatggcttcattcgcttctacaag
tccttgccacaacttggcgaagaggccataaggatattcgatagaggggactggtacaca
gcacacggcgatgatgccaccttcattgcccgaactgtctacaagacaacatcagttatc
cgccagcttggccgaagcgatcataccggccttccatctgttaccatgaccgtcaccgtc
ttccggcaattcctccgtgaagccctcttcaagctagggaaacgaatcgagatctgggcc
agccccagcggccgcatgaactggaagatcgtcaagcaagcatctccgggaaacctacag
gatgtggaggatgaactaggtggccagtttgagggagctcccgtcatcctagcagtcaag
atctcagccaaggcttcggaggccagggcagtgggagtgtgctttgccgatgccagtgta
cgggaactgggagtcagcgagttcctcgataacgatctatactccaacttcgaagcattg
ctcattcaactaggcgttaaagaatgcatcatcacacaggacaagggcgagaaggaaaag
gatccagagttggccaagttgaggcagatcatcgacaactgtggtgttgccgtatcagaa
agacctgcaggtgagttcggcatcaaggacatcgagcaagatctatcacggttgttgaag
gatgaacgtgctgccaccctactcccacaaaccgacttgaaacttgccatgggatctgcc
gcggccctcatcaagtatctaggcgtactgcacgattcctccaattttggccagtatcaa
ctgtaccaacacgacctggcccagttcatgaagctggatgcggcagcattgaaggccctc
aacctcatgcctggtgctagggatggagcaaagaacatgagtctctacgggttgttgaac
cactgcaagactcctgtgggaagcaggctactttcacaatggctcaagcagccactcatg
aatgcggaggagattgagaagcgccaacagctggttgaggcctttgccaatgacaccgag
ctacgacagacaatgcaggaagaacatctcaggtccatccctgacttgtatcggctgtct
aagcggttccagcgtggcaaggcaacactagaggacgtcgtgagggcataccaggtggtc
atccgcgtaccaggctttattggaaccctcgaaggcgtgatggatgaagcttaccgtgac
cctcttgatgaggtctacaccaacaagctccgcgagctctcagacagccttgtcaagctt
caggaaatggtcgagaccaccgttgatcttgacgccctcgataaccacgagttcatcatc
aagcccgaattcgacgatagtctacgcatcattcgcaagaagctggaccgacttcgtacc
gacatggacaacgagttcgccgatgccgccgatgatctcggccaagagcgtgagaagaag
atcttccttgagaaccacaaggttcacggctggtgcatgcgtcttacccgtaccgaagct
ggctgcatccgcaacaactcgcgctacctcgagtgctcaacccagaagaacggtgtctac
ttcaccaccaagactctccaaaccctccgccgtgaattcgatcagctctcccagaactac
aaccgcacccaaagcagtctcgtcaacgaagtcgtcggcgtcgcttcctcctactgcccc
gtcctcgagcggctcgccgccgttctcgcccacctcgacgtcatcgtctcctttgcgcac
tgctccgtccacgctcccacctcctacgtccggcccaagatccacccccgcggcaccggc
cgcaccgtcctcaccgaagcccgccacccatgcatggaagtccaagatgatgtgactttc
atcaccaacgacgtcaccctttcacgagaagactcctccttcctcatcatcacgggcccc
aacatgggtggcaagtcgacctacatccgccaaatcggcgtaatcgcgctcatggcgcaa
atcgggtgcttcgtgccctgctcgtccgcagaactcaccatcttcgacagcatcctcgcg
cgcgtcggcgcgtccgactcgcagctcaagggcgtgtcgaccttcatggctgagatgctg
gagacagccaacatcctcaagtcggccacggccgagagcctgatcatcatcgacgagctg
ggccgcggcacatctacctacgacgggtttggtctcgcgtgggccatctccgagcacatc
gtcaaagagatcggctgctttgcgctgttcgctacgcacttccacgaactgactgcactg
gcggaccagtatcctaatgtcaagaatttgcatgttacggcgcatatcagcggcactgat
gccgacaccgacgctgacagtgaaaaagagaagaagaagcgcgaggtaacgctcttgtac
aaagtctcgccgggagtctgcgaccagagcttcggcatccacgtagccgagctggtccgt
tttcccgaaaaggtggtgcgcatggccaagcgcaaggcggacgagctggaggactttact
agcaagcatgacgaggagaatggaggtgggctgggggtgcagtacagcaagcaggatgtg
gaggagggtagtgcgttgttgaaggacgtgctggtgaagtggaaggatgaggtcaagagt
gggcagatgagtaaggaggagatggtggggcgattgaaggagttggtgcagaaggatggc
aggttggtggggaacccgttttttaagagtgttctggctttgtga
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