Sordaria macrospora: 10809216
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Entry
10809216 CDS
T01610
Symbol
SMAC4_00164
Name
(RefSeq) uncharacterized protein
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
smp
Sordaria macrospora
Pathway
smp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
10809216 (SMAC4_00164)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smp03400
]
10809216 (SMAC4_00164)
DNA repair and recombination proteins [BR:
smp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
10809216 (SMAC4_00164)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_PK_bind
Ku
Ku_N
VWA
Sigma70_r1_1
Motif
Other DBs
NCBI-GeneID:
10809216
NCBI-ProteinID:
XP_003351623
UniProt:
F7VKC2
LinkDB
All DBs
Position
4:complement(join(3346447..3346458,3346517..3347210,3347264..3347661,3347721..3348236,3348287..3348347,3348408..3348901))
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AA seq
724 aa
AA seq
DB search
MADKEAIVYVMDLGKPMADCHNGRDESDLDFGMRYIWDKISTTVAASRKTWNVGVVGLNT
DETDNNENREEYQGYENISVLQELGPMSMTSLRALKSQIEPSETSSADAISAIVVALRMI
QVYTKKLKYKRKIILVTNGESPIDDDQSEDVAAMLNNVGIELVVIGIDFDDAEYGFKEED
KTQHKAENERILKTLVDLCENGEFGTMAQAVEELAIPRIKPVRPFKAYDGPLTLGDPQKY
PSALSIPVERYFKTKRATPPSASNVAIHTGPPQAEVIDEDSGAPMSGVEFQPVKQLRTYR
VDDAKAAGGKKDIEMEDLAKAYQYGRTVVPFSTSEEDYVKYQTTKSFTIIGFVPMSSYEP
FINMGETGLIVAQKVNEQAELGLSALIHALHELESYAVARYVNKDKAAPQILLLKPNPAI
EDDVECLYDVPLPFAEDVRSYQFPPLDKVLTITGNVLTEHRLLPNDDLQQAMGDYVDAMD
LTDFGQDEDGNPAEYAPIDDVYNPVIHHMNQATRNRAVNPEAPLPPVADILTRFTHPPEP
LIAKAKSEINGLIEAAEVKKVPPKVQGKRGRKDTVKPLSGLDIDALLGKTRPRAKKTPIS
AENAIPEFKQILETAEDDETIETAAKQMGDIIRKLISDSFADVLYPRAAENLRVMREELI
SMEVPTLYNTYLTELKDSLLSGKLNGDRREMWFRWVVGGRLGLITQDESEVSEVGEDEAK
AFLK
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaggaagccatcgtctatgtgatggacctgggcaagcccatggcggactgc
cacaacggacgtgacgaatccgacctcgacttcggcatgcgctacatctgggacaagatc
tcaaccaccgtggccgccagccgcaagacctggaacgtaggcgtcgtgggcctcaacacc
gatgagacagacaacaacgaaaacagggaagagtaccagggctacgaaaacatctcggtc
ctccaggagctgggacccatgtccatgacttcgctcagggcattgaagagccaaattgag
ccttccgagacctccagcgcggacgctatctcggcaattgtggttgctctcaggatgatc
caggtgtacaccaagaagttgaagtataagcggaagattatcctcgtgacgaacggggag
tcgcctattgatgatgatcaatctgaagacgtagcggccatgcttaataatgtggggatc
gaacttgtcgtgatcggtattgatttcgacgatgcagagtatggcttcaaagaggaagac
aagacacaacacaaggccgaaaatgagaggattctcaagacgttggttgacctctgcgag
aacggcgagttcggcaccatggcccaggcagtggaagaactcgccattccccgaatcaag
cccgttcggcctttcaaggcatacgatggccccctgacgctcggagatcctcaaaaatac
ccgagtgctctgagtataccagttgagcgctacttcaagaccaagcgagcaacacctccg
tcagcgagcaatgtcgccatccatactgggccgcctcaggcagaggttatcgacgaggac
agcggcgcaccgatgagtggtgtggagtttcagccagtcaagcaactgcgcacatacaga
gttgatgatgccaaggcagcaggagggaagaaagacatcgagatggaggaccttgccaag
gcatatcaatatgggaggaccgtagtccccttcagtacaagcgaggaggattacgtgaag
taccagacaacgaagagtttcaccatcatcggctttgtccccatgagcagctacgaacca
ttcatcaacatgggagagacaggcctcattgttgcccagaaggttaatgagcaagcggag
ctcggcttgtcggctcttattcatgctttacatgagcttgagtcttacgcggtggccagg
tatgtcaataaagacaaagcggcaccacaaatccttcttctcaagccaaacccggcaatc
gaagacgatgttgagtgcttgtacgatgtcccactaccgtttgcggaggatgtcagaagt
tatcaattccctccgttggacaaggtgttgaccattacgggcaatgtactcacggaacat
cgccttctgcccaacgatgatttacagcaggcgatgggcgactatgtcgatgcaatggac
ctgaccgatttcgggcaggatgaggatggaaatcctgcggaatacgcgcccatcgatgac
gtctataaccccgtcattcaccacatgaaccaagcgacccgcaatcgcgcagtgaacccc
gaagctcccctaccacccgtagccgatattctcacacgcttcacgcatccgcctgagcca
ctgatagctaaggccaagtcagagatcaacggattgatagaagcagcagaggtcaagaag
gttccaccaaaggtgcaaggcaaacgcgggaggaaagacaccgtcaagcccctctccggc
ttggacatcgacgcccttctcggaaaaacccggccacgagcgaagaagacgcccatatcc
gcggaaaacgcgattcccgaattcaagcagatcctggaaacagcagaagacgacgaaacc
attgagacggccgccaagcagatgggcgatatcatccgcaagcttatcagcgacagcttt
gcggatgtgctgtaccccagagctgcagagaacctgcgggtgatgagggaggagctcata
agcatggaggtcccgacactttacaacacgtacctcacggaactcaaggatagcttgctt
tcgggtaagttgaatggggatcgaagggagatgtggtttagatgggttgttggtgggcgc
ttggggttgatcacacaggacgaatctgaggtgtcggaggttggtgaggatgaggcgaaa
gctttccttaagtga
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