Sordaria macrospora: 10809463
Help
Entry
10809463 CDS
T01610
Symbol
SMAC4_00424
Name
(RefSeq) uncharacterized protein
KO
K12828
splicing factor 3B subunit 1
Organism
smp
Sordaria macrospora
Pathway
smp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
10809463 (SMAC4_00424)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smp03041
]
10809463 (SMAC4_00424)
03036 Chromosome and associated proteins [BR:
smp03036
]
10809463 (SMAC4_00424)
Spliceosome [BR:
smp03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
10809463 (SMAC4_00424)
Complex B
10809463 (SMAC4_00424)
Complex C
U2 SnRNP specific factors
10809463 (SMAC4_00424)
Chromosome and associated proteins [BR:
smp03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
10809463 (SMAC4_00424)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
HEAT_EZ
TOR1L1_N
HEAT_EF3_N
HEAT_2
Htt_N-HEAT_1
UTP20
mTOR_dom
XMAP215_CLASP_TOG
RRP12_HEAT
Adaptin_N
UNC45-central
Opi1
Motif
Other DBs
NCBI-GeneID:
10809463
NCBI-ProteinID:
XP_003351877
UniProt:
F7VL30
LinkDB
All DBs
Position
1:7880206..7883853
Genome browser
AA seq
1215 aa
AA seq
DB search
MSDSDFEQIKKLQQERNAAAAAKNGSRSFDPANQRSDNNTKAKLGEVWDTDLYERDSGDK
FAGYHTTLPAADGDDEEMEDADSGRRLVGQYTATRAQIDEFAHGDGVEEDDPLAGRGEKS
NRITDRETDYQKRRFDRVLTPTRADPFAANRQAGAAEEGESYREIMERRELEREEERVRR
AIEQKTKEGGPVEEHQPTLKDAGDKENEEAGSTEAAAGRKRKKRWDVASTEDATPAPEPK
KRSRWDQAPSVAAPGAPGAEPKKRSRWDQAPSATPVGNVGLATPMHPTQTAVVQPAFGTD
AAGRYAPLSDEELDAMLPGPEQGYKILDPPPGYAPVRAPAHKLMQAPAPTTGFMMQDPDS
GRMTGQQVPKEIPGVGDLQFFKPEDMAYFGKLTDGADEESLSVEELKERKIMRLLLKVKN
GTPPMRKTALRQLTDNARNFGAGPLFNQILPLLMEKTLEDQERHLLVKVIDRILYKLDDM
VRPYVHKILVVIEPLLIDQDYYARVEGREIISNLSKAAGLATMISVMRPDIDHVDEYVRN
TTARAFAVVASALGIPALLPFLRAVCRSKKSWQARHTGVKIVQQIPILMGCAVLPHLKQL
VDCIGPNLNDEQTKVRTVTSLAIAALAEASNPYGIESFDDILNPLWTGARKQRGKGLAGF
LKAVGYIIPLMDEDYANYYTSQIMEILLREFASPDEEMKKVVLKVISQCAATDGVTAGYL
KEHVLDEFFKSFWVRRMALDKRNYRQVVETTVDIGQKVGVSEILERIVANLKDESEAYRK
MTVETVEKIVASLGAADIGERLEERLIDGILHAFQEQSVEDIVMLNGFGSVVNALGTRCK
PYLPQIVSTILWRLNNKSATVRQQAADLISRIAMVMKQCGEDALMGKLGIVLYEYLGEEY
PEVLGSILGALRSIVTVVGISQMQPPIKDLLPRLTPILRNRHEKVQENTIDLVGRIADRG
PESVNAREWMRICFELLDMLKAHKKGIRRAANNTFGFIAKAIGPQDVLATLLNNLRVQER
QSRVNTAVAIGIVAETCAPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMAKDYV
YAVTPLLEDALIDRDQVHRQTAASVVKHIALGVVGLGCEDAMVHLLNLLYPNLFETSPHV
IDRIVEAIEAIRMAVGPGLVLNYVWAGLFHPARKVRTPYWRLYNDAYVQCADAMVPYYPN
LVEEGIDRTELAIVF
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactcggattttgagcagatcaagaagctccagcaggagcgcaatgctgctgct
gccgccaagaatggttcgcgtagctttgatcctgccaaccaacgatccgacaacaacacc
aaagccaagctgggagaagtgtgggacaccgacctgtatgaacgcgacagtggcgacaag
tttgcgggctaccacaccaccctgcccgctgccgatggcgacgatgaagagatggaagat
gccgactccggccgccgcctagtaggacagtacaccgccacccgagcccagatcgatgag
ttcgcacacggtgatggcgttgaggaggatgatcccctggctggccggggcgaaaagagc
aaccgcatcaccgacagggagaccgactatcagaaacgccgattcgaccgcgttctgacc
cctacacgagccgacccttttgctgccaaccgccaggcaggtgccgctgaggaaggggaa
agttaccgggaaatcatggagcgtcgcgagcttgagcgcgaagaagagcgcgtacgacgg
gccatcgagcagaaaacgaaggagggcggccctgtcgaggagcaccagcctaccctcaag
gatgccggtgacaaagagaacgaagaggctggctctactgaagctgcggctggccggaag
cgcaagaagagatgggatgtggcctctacggaagatgccaccccggctccagagcccaag
aagaggtccaggtgggatcaagcaccatctgttgccgctccaggagctccaggggcggaa
cccaagaagcgatcccgctgggaccaggcgccttctgccactcccgttggcaatgtcggc
ctagccacgccgatgcaccctacccagaccgccgtggtacagccagctttcggcactgat
gcggccggtcgatatgcgccgcttagcgacgaggagctggatgccatgcttccaggcccc
gagcaaggttacaagattcttgatccaccaccagggtatgcccccgtgcgagcaccggca
cacaagctgatgcaggctccggccccaacaacgggcttcatgatgcaggaccctgacagc
ggacggatgacgggccagcaggtaccaaaggagatccccggtgtgggagacctgcagttc
ttcaagcccgaagatatggcatacttcggcaagcttaccgacggagctgatgaggagagc
ttgagcgtcgaagagctcaaggaaagaaagatcatgagacttctcctaaaggtcaagaac
ggtactcctcccatgagaaagactgcgctcagacaactgacagacaatgctcgcaacttc
ggtgccggccccctcttcaaccaaatccttcccctgctcatggagaagacactggaggat
caggaacgccatcttctcgtcaaggttatcgatcgtatcttgtacaagctcgatgacatg
gttcgaccatacgttcacaagattctcgtcgttatcgaacctcttcttatcgatcaggac
tactatgcacgtgttgagggtcgggaaattatttcaaacctcagcaaggctgctggtctt
gccacaatgatcagtgtcatgcgtccagatattgaccacgtagatgagtacgtcagaaac
actactgccagagcctttgccgtagttgcttcggcactgggtatcccagctctgcttccc
ttcttgcgagctgtgtgccgaagcaagaagtcgtggcaagctcgtcacacaggcgtcaag
attgtgcagcagattcccattttgatgggttgcgcagtcttgccccatctcaagcaactg
gtcgactgtatcggacccaacctgaacgacgaacagaccaaggtccgcacagtgaccagt
ttggccatcgctgctctcgccgaggcatccaacccctacggtatcgagagcttcgatgac
atcctcaaccctctctggaccggtgcccgcaagcaacggggcaagggtctggctggtttc
ctcaaggctgtcggttacatcatcccgcttatggatgaagactatgccaactattacacc
agtcaaattatggagattctcctacgagaatttgcctctccagatgaagagatgaagaaa
gttgtgctaaaggtgatttcacaatgcgccgccaccgatggagtaacggctggatacctc
aaggagcatgtgctggacgagttctttaagagcttctgggtacggcgcatggctctagac
aagcgcaactaccgtcaggtcgttgagactactgttgacattggccaaaaggttggtgtc
agcgagattctggaaaggatcgttgccaatctgaaggacgagagcgaagcctatcgcaag
atgacggtggagactgtcgagaagattgtggcctctctcggtgcggccgacattggtgag
cgtttggaagaacgtctcattgatggcattcttcatgcgttccaggaacagagcgttgag
gatatcgtcatgctcaacggcttcggttcggtggttaacgcacttggcacccgatgcaag
ccttaccttcctcagattgtcagtaccattctctggcgtctgaacaacaagtcagctact
gtacgacagcaagcagctgatttgatctcccgcattgccatggtcatgaagcaatgcggt
gaggatgccctcatgggtaagcttggtattgtcctttacgagtacctcggtgaggagtac
cccgaggttcttggctccattcttggtgcccttcgctccattgttactgtcgtgggcatc
agccagatgcagcctcctatcaaggatcttctgcctcgcctcacccccattcttcgtaac
cgacacgagaaggtgcaggagaacacgattgatcttgtaggtcgtatcgccgatcgcggt
cccgagagtgtcaacgctcgcgaatggatgcgtatctgctttgagcttctcgacatgctg
aaggctcacaagaagggcatcagacgtgctgccaacaacacgttcggtttcatcgccaaa
gctatcggtcctcaggatgtccttgctaccctgttgaacaacctccgcgttcaggaacgt
caatcccgtgttaacacggccgtcgccatcggtatcgttgccgagacatgcgcgcccttc
accgtgttgcccgccctcatgaacgagtaccgtgtgcctgagctcaacgtccagaacggt
gtgctcaagtctctctccttcctcttcgagtacattggcgagatggccaaggactacgtc
tacgccgtcacgccgctcctcgaggacgcgctcatcgacagagaccaagtgcacagacaa
acagctgccagtgtcgtcaagcacattgcccttggtgtcgtcggtctcggttgtgaggat
gccatggtccacttgctcaacttgctgtatcccaacctgttcgagaccagtccccacgtc
atcgaccgcatcgtcgaagctatcgaggccatcaggatggccgtcggtccgggactggtc
ctcaactacgtctgggccggtctgttccatccagcaagaaaggtgcggacaccatattgg
cgtttgtacaacgatgcgtacgtccagtgcgcggacgctatggtgccgtactaccctaac
ctcgtcgaggagggcatcgacaggacggaattggcaattgtgttttag
DBGET
integrated database retrieval system
