Sordaria macrospora: 10809819
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Entry
10809819 CDS
T01610
Symbol
SMAC4_02625
Name
(RefSeq) uncharacterized protein
KO
K11096
small nuclear ribonucleoprotein D2
Organism
smp
Sordaria macrospora
Pathway
smp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
10809819 (SMAC4_02625)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smp03041
]
10809819 (SMAC4_02625)
03032 DNA replication proteins [BR:
smp03032
]
10809819 (SMAC4_02625)
Spliceosome [BR:
smp03041
]
Complex A
U1 snRNP components
Sm proteins
10809819 (SMAC4_02625)
U2 snRNP components
10809819 (SMAC4_02625)
Complex B
U1 snRNP components
10809819 (SMAC4_02625)
U4/U6.U5 tri-snRNP components
10809819 (SMAC4_02625)
Complex C
U2 snRNP components
10809819 (SMAC4_02625)
DNA replication proteins [BR:
smp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
10809819 (SMAC4_02625)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
10809819
NCBI-ProteinID:
XP_024511368
LinkDB
All DBs
Position
2:complement(join(3833849..3833891,3833981..3834186,3834262..3834313,3834473..3834505,3834611..3834636))
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AA seq
119 aa
AA seq
DB search
MATADAKIQELLTKPRNELTEYEVSLLEEHEFSAGPLSILQTAVRSHSQVLISVRNGRKI
LARVKAFDRHMNMVLENVKEMWTETPRLANGKKGKPVNKDRFISKMFLRGDSVILVLLS
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atggctacagcagacgcaaagattcaggagcttctcacgaagcctcgcaatgagcttact
gaatacgaagtttctctcctcgaagagcacgagttctccgccggtcctctgtccatcctc
cagaccgccgtccgcagccactcccaagtcctcatttcggtccgcaacgggcgcaagatc
ctcgcgcgcgtcaaagctttcgatcgccacatgaacatggtgctggagaacgtcaaggag
atgtggaccgagacgccccgactcgccaacggcaagaagggcaagccggtaaacaaggac
aggtttatcagcaagatgttcctgagaggcgactccgtcatccttgtcctcctaagctag
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