Sordaria macrospora: 10809872
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Entry
10809872 CDS
T01610
Symbol
SMAC4_02678
Name
(RefSeq) uncharacterized protein
KO
K15171
transcription elongation factor SPT4
Organism
smp
Sordaria macrospora
Pathway
smp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
10809872 (SMAC4_02678)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smp03021
]
10809872 (SMAC4_02678)
03019 Messenger RNA biogenesis [BR:
smp03019
]
10809872 (SMAC4_02678)
Transcription machinery [BR:
smp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
10809872 (SMAC4_02678)
RNA polymerase I system
10809872 (SMAC4_02678)
Messenger RNA biogenesis [BR:
smp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
10809872 (SMAC4_02678)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
10809872
NCBI-ProteinID:
XP_003352243
UniProt:
F7VX58
LinkDB
All DBs
Position
2:complement(join(3647636..3647666,3647757..3648007,3648079..3648159))
Genome browser
AA seq
120 aa
AA seq
DB search
MSENYVAPGQQRYLRACMVCSIVMTYARFRDEGCPNCEDFLHLQGSPDQIDSCTSQVFEG
IITIANPQRSWVAKWQRLDGYVKGVYATKVSGQLPDDVRTTLEDDGIQYIPRDGSATEAD
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagaactacgtcgcccccggccaacagcgctaccttcgggcctgcatggtctgc
tctatcgttatgacctacgctcgcttccgtgacgaaggatgccccaactgcgaagacttc
ctccatctccaaggctcgcccgatcagatcgacagctgcacgtcgcaagttttcgaggga
atcatcaccattgccaacccgcaaaggtcgtgggtggcgaagtggcagaggttggacggt
tatgtgaagggtgtatacgcgaccaaggtgtcgggccagttgccggatgacgtccggact
acgttggaggatgacggcatccagtatatcccgcgcgatggcagtgcgacggaggcggac
tag
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