Sordaria macrospora: 10810413
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Entry
10810413 CDS
T01610
Symbol
SMAC4_01625
Name
(RefSeq) uncharacterized protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
smp
Sordaria macrospora
Pathway
smp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
10810413 (SMAC4_01625)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smp03021
]
10810413 (SMAC4_01625)
03019 Messenger RNA biogenesis [BR:
smp03019
]
10810413 (SMAC4_01625)
Transcription machinery [BR:
smp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
10810413 (SMAC4_01625)
Messenger RNA biogenesis [BR:
smp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
10810413 (SMAC4_01625)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_2
zf-CCCH_RBM22
zf-CCCH_4
zf-CCCH_9
zf-CCCH_DUS3L
zf-CCCH_12
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
10810413
NCBI-ProteinID:
XP_003352791
UniProt:
F7VRC6
LinkDB
All DBs
Position
1:complement(5289675..5290640)
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AA seq
321 aa
AA seq
DB search
MATTTKTTTTNSLPSGTGTGGGLITQMLTHTPLQYTFSFTPFLQKTYQHSLPADRPICKA
YVSGNCPLKSHCPERHVTTSNTNTGGGGHGGNFSGGFGSLVCKHWLRGLCKKGESCEFLH
EYNLRKMPECNFFVRNGYCSNGDECLYLHIDPLSRLPPCPHYERGFCPLGPRCDKKHFRR
KLCLYYLAGFCPDGKLCKEGAHPRWTADKDMEKPRAKGEMTAEQLQQQQQQQNMNGGAGG
GDNYGMGGMAQQTGANEYMDRERERDRDNREREMMMGGRDRDGGGHDRHKDRFGGGGGGG
GRGRGGWRGRGRGGGFRGKGH
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaacaacaaaaacaacaacgacaaactccctcccctcggggacaggaacagga
ggaggcctaatcacccaaatgctcacccacacgcctctccaatacaccttctccttcacg
cccttcctacaaaagacctaccagcactcgctccctgccgaccgacccatctgcaaagcc
tacgtatctggcaactgtccgctcaaatcgcactgcccggagcgccacgtcaccacatcc
aacaccaacacgggtggcggcggtcacggcggcaatttctctggtggcttcggctctttg
gtgtgcaagcactggctgcgcgggctctgcaagaagggcgagtcgtgcgagtttttacac
gagtacaacctgcgcaagatgcccgagtgcaacttctttgtgcgaaacgggtactgcagc
aacggggacgagtgcttgtatctgcacattgaccccttgtcgcggctgccgccctgtccg
cactacgagaggggcttctgtccgttgggccccaggtgcgacaagaagcatttccggcgg
aagctgtgcttgtattatctggcgggcttctgtccggatgggaaactgtgcaaggagggc
gcgcatccgaggtggacggcggataaggatatggagaagcccagggccaagggcgagatg
acggctgagcagctgcagcaacagcagcaacagcagaacatgaatggtggcgctggagga
ggtgataattatggaatgggtggaatggcgcagcagacgggcgcgaacgagtacatggac
cgcgagagggagcgggatagggataatagggagagggagatgatgatggggggacgtgat
agggacggcggcggtcatgatcgtcacaaggatcgctttggtggtggtggtggaggagga
ggcagaggtaggggaggatggaggggaagaggaaggggaggggggttcaggggtaaaggt
cattag
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integrated database retrieval system