Sordaria macrospora: 10810751
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Entry
10810751 CDS
T01610
Symbol
SMAC4_03414
Name
(RefSeq) uncharacterized protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
smp
Sordaria macrospora
Pathway
smp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
10810751 (SMAC4_03414)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smp03019
]
10810751 (SMAC4_03414)
03036 Chromosome and associated proteins [BR:
smp03036
]
10810751 (SMAC4_03414)
Messenger RNA biogenesis [BR:
smp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
10810751 (SMAC4_03414)
Chromosome and associated proteins [BR:
smp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
10810751 (SMAC4_03414)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nucleoporin_FG
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
10810751
NCBI-ProteinID:
XP_065947688
LinkDB
All DBs
Position
7:join(989791..989890,990061..993800,994005..995711)
Genome browser
AA seq
1848 aa
AA seq
DB search
MSFFGGGGFGQNTNTGTGFGSSGFGTNTNTTGTGFGTGTTGFGAPAQPAATGGGLFGSGA
TGTTGGFGSNTAGGFGTGGGFGAKPAFGATPSTTGGGLFGASTTATTGTGFGSTGAFGTN
TATTGTGFGTGGGLFGATKPATTTGFGAPATTTGFGATNTTGGSLFGGGGTTSAFGSANN
PGIGTNVPDPPGTAGVAFSPFQEKEANGSQVSFQNILFMDAYKKWSAEELRLVDYQQGRR
YGGQGGTGAFGATSTFGSTGGFGTNTGTTGGFGSGTTTTGGGLFGSGNTGTTGGFGASTT
ANTGGFGTQTTGGGLFGQQNKPATGGLFGSSTTTPATGTGLFGSGGTTGGFGSNTGTTST
GFGANTGTTGGGLFGQQPAKPAGFGFGSTGTTTTGTGFGTGATTGGFGTNTATQNTGGGL
FGNTAQNTGTTGGGLFGTQQQTQQQPASTGFGTGFGAQQPATGGGLFGTANNQAKPAGGL
FGTATTTTPATGGGLFGTGGTTGGFGQANNTQTSGGLFGAKPAATMGTGLFGTTPAQPAQ
TGGLFGSLGTQQTQQPAAGGGLFGTANNQAKPAGGLFGSTPAAGGGLFGSAPAQQNTGLF
GATNTQQQAGGLGTSLLGGAQNQQQPQTFSAGINDINAYGAATLFSNLPDNQIQNPGPLA
TPLNGSAKAKSRSILPMYKLSPANASRMVTPQKRGFGFNYSTYNSPVSTPGGLGQSLLAG
SINRGLGKPVSTTNLRRTFNAEDSILTPGAFSATNNNRLLGSSHKKLVINKDMRSDLFQS
PATKDKLLQDGNTSARKLTKRVSFDTSNVEATQNGASSQQEFHDLDDDSDLGFLKPSSAN
GRTNGAANGSKASDASPEMEQVKGNELAIVPEESSFLSTSTVTDAKPVKQIDAGSYWMSP
KLEEIQAMNRVQRQSVVDFTVGRENVGSIRFKVPVDLSNIDVENIYDNIVRLVPRSCTVY
PNAALKPPVGKDLNVPSLISLEHSYPRGGLRVGGRRLERHIEQLKTITDTTFESYDIPTG
VWTFSVEHFTTYGLFYDEEDSEDEEITEIEPTPRPPTEAVVKNEFTSPEVDPDDTFEYRH
STGRRAIPGAFDQRAMYDDEELLDADQQQGMHSSHPKGADAPLPSREWPDDESMVDGQDA
YDPDAEKSSQLDLDEEQYDLALTQITDNTNIVPAGILRARMRAAKRSTAPTKIEVAGGDD
WTQILQASVRASRTVDRNLLREQNESGEAWAAKESGSPAPREPVVHEGQGFATSIDLMKS
LFEQARGPAQPVPPSGGFLKWPYQKRNQVDDEAAAPAPRATWGPNELLITTANDEASLIP
VEGTASAAETKSALHKLQQYIEITHAHHDVPLNELRDLTENDSVWDLAFLLANDEAELPA
FWKKLVAVDTDRLLKEASTPEEKAIILLAGNRVSDACDQLIGGKDFRLATLVSSIGSQSK
DIKTQLEDWKDSNVLSEMSEPIRALYELLSGNACVCAGVKNAPIENRASSFMIAERFNLS
WMQSFGLRLFYNSKTADGEFDMAKAINSFQDDIEQDKEPEPESPLWTLLKTFATRDFNWT
ESDRLGWLLTRSIYFTHLISFGHDAEEKLDQASVSFASSLTAQGHWVPATFVLLTLSDPV
ARETAIRDHLGRHAHLIGSFHEAKSPFSALRRFGITESWVWEAKALDFRAKEDHRQEFLA
LVWAGNYKEANTAFVERVGPDLVIERDWKRLVKFAQLLFKVKGKLGSVQEWERGGAAVYL
LYPLKVAALRNQLAASGEDEEEEKRLDRLLVDGLVALGERLRHVPGATGASDVKREAAVA
DMAEELIKGRVNGQSEMGGTGADPRLFGLLPEDVRGRYMRGMALEGMC
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttctttggcggcggtggcttcggccaaaatactaacacaggcaccggctttggc
tcgagtggcttcggtaccaacaccaacaccactggcacaggtttcggcacaggcactact
ggattcggtgctcccgcgcaaccagccgctactggcggtggtctctttggcagcggcgcg
accggcactactggcggcttcggcagcaacacagcaggcggctttggcactggcggcgga
tttggagctaagcctgccttcggagctaccccttcgaccaccggcggaggtcttttcgga
gcttccacgactgcgactaccggcactggcttcggcagcacaggagccttcggcacaaac
accgcgactactggcacagggttcggaactggtggcggtttgttcggtgctaccaagcct
gcgaccactaccggctttggcgctcccgcaaccactactggcttcggcgccaccaacacc
accggcggctccctcttcggcggcggcggtactaccagcgccttcggttctgccaacaac
cccggcatcggcactaatgttcccgatcccccgggcaccgcgggcgtcgccttctctccc
ttccaggagaaggaagctaacggttcccaagtctcgttccagaacatcctgtttatggat
gcttacaagaagtggtctgccgaagaattgagattggtcgattatcagcaaggaaggaga
tacggtggtcaaggtggcactggtgctttcggagctacctccacctttggatcgactggc
ggtttcggcaccaacaccggcacgactggcgggtttggcagcggcaccaccaccaccggc
ggtggtctgttcggcagcggcaacactggcacgacgggtggcttcggcgcttcgaccacg
gcgaacactggaggcttcggcactcagacgacgggaggtggtcttttcggccagcagaac
aagcccgccactggtggccttttcggttcgagcacgacgactcccgccaccggcactggt
ctctttggtagcggaggtacgactggaggatttggctccaacaccggcacgacgagtact
ggctttggcgcaaacactggtactactggcggcggtctcttcgggcagcaacctgctaag
cctgctggctttggcttcggaagcactggtaccaccaccaccggcactggctttggtacg
ggcgctacgaccggcggatttggaaccaacactgctacccagaacaccggcggtggtctt
ttcggaaacactgctcagaacaccggtactaccggcggtggcctcttcggtacccagcaa
caaacccaacagcaacccgcaagcaccggcttcggtactggcttcggtgctcagcagcct
gctacaggaggcggtttgttcggtaccgccaacaaccaggcgaagcccgcaggtggtctt
ttcggcaccgccactactactactcctgctactggcggtggtctttttggcaccggcggg
accacgggtggcttcggccaggcgaacaacactcagacttctggtggcttgtttggtgct
aagcctgcggccactatgggcactggtcttttcggaactaccccggcccagcctgctcaa
accggtggactctttggcagcctgggtactcagcagactcagcagcctgctgcgggtggc
ggcttgttcggcactgccaacaaccaggcgaagcccgcgggtggtcttttcggctcgact
cccgctgctggcggtggtctcttcggtagtgcccctgcccagcagaacaccggtttgttt
ggagcgaccaacactcagcagcaggctggtggtcttggaacctcccttctcggaggcgcc
cagaaccagcaacagcctcagaccttctccgcgggtatcaacgatattaacgcctatggc
gctgccacgttgttctctaacctgcctgacaaccagatccagaaccctggtcctcttgcc
accccccttaacggctctgcgaaggccaagagccgctcgatcttgcccatgtacaagctg
agcccggctaatgcctctcggatggttacgccccagaagagaggtttcggattcaactac
agcacctataactccccggttagcacccctggcggtttgggacagagccttttggctggc
agcatcaaccgtggtctcggcaagcccgtctccaccactaacctccgccgcaccttcaac
gccgaagacagcatcctcacccccggtgctttctctgcgaccaacaacaaccgtctgctt
ggctctagccacaagaagcttgtcatcaacaaggatatgcgcagcgacttgttccagtct
ccggcgaccaaggacaagcttctccaggacggcaacaccagtgcccgcaagttgaccaag
agagtcagctttgatactagcaacgtcgaggctacccagaacggtgcttcttcgcagcag
gagttccatgatcttgacgacgacagtgacttgggcttcctgaagccttcttccgctaat
ggccgcactaacggtgccgccaacggctccaaggcctctgatgcctcccccgagatggag
caggtcaagggcaatgagctcgccattgttcccgaggagtcttctttcttgtccacttct
actgtcaccgatgccaagcccgtcaagcagatcgatgccggttcttactggatgtcgccc
aagctggaggagatccaggccatgaacagggtgcagcgccagagcgttgttgactttacg
gttggtcgtgagaacgttggaagtatccggttcaaggtccctgttgatcttagcaacatc
gacgtcgaaaacatctatgacaatattgtccgcttggtgccccgctcctgcaccgtctat
cccaacgccgcccttaagccccctgtcggcaaagacctgaacgttccctcgttgatctcg
ctcgagcatagctaccctcgtggcgggcttcgcgtcggcggccgtcgccttgagagacac
atcgaacagctgaagacgatcacagataccaccttcgagagctacgacattcccactggt
gtttggaccttctccgttgagcacttcaccacctacggtctcttttacgatgaggaggat
tccgaggatgaagagatcactgagattgagcctactccccgccctcccaccgaggctgtt
gttaagaacgaattcacctcgcccgaagtcgatcccgatgacaccttcgaatacagacac
agcaccggccgccgtgccatccctggcgcttttgaccagcgcgccatgtacgatgatgaa
gagcttttagatgccgatcagcagcagggtatgcactcctctcaccccaaaggagccgat
gctccgttgccgtctcgggagtggcctgacgatgagagtatggtggatggacaggacgcg
tacgatcccgatgctgagaagtcatcccagcttgacctcgacgaagagcaatacgacctc
gccctcacccagattaccgacaacaccaacatcgttcccgccggtatcctcagagcgagg
atgagagccgccaagagatcgacagcccctactaagatcgaggttgccggtggcgatgat
tggacacaaattctgcaggcgagcgtgcgggcatcaaggacggtagatcggaacttgctg
cgggagcaaaacgagtcgggcgaggcgtgggcggccaaagagagcggaagtccggctccc
cgcgagcctgttgtgcatgaaggacaagggttcgcgacgagcattgacttgatgaaatcg
cttttcgagcaggcgaggggcccagctcagcctgtccctccatcagggggtttcctgaag
tggccgtaccaaaagcgcaatcaggttgacgacgaagccgccgcccctgctcctcgtgcc
acctggggccccaacgagctcttgatcaccactgccaatgacgaggctagccttatcccc
gttgagggtactgcctctgccgcggagaccaagtcggccctccataagctccagcagtat
atcgagatcactcacgcccaccacgatgttcctctgaatgaacttagggatctcacggag
aacgactctgtctgggatttggctttccttcttgctaatgacgaggctgagcttcccgct
ttctggaagaagttggtcgctgtggatactgaccgcttgcttaaggaggcgtctactccg
gaggagaaggctatcatccttctcgccggtaaccgcgtctctgatgcctgcgaccagttg
attggcggcaaggacttccgcctcgctactcttgtgtccagcatcggttcccagagcaag
gacatcaagacccagttggaagactggaaggactcgaacgtcttgtctgagatgtctgag
cctatccgtgctctctacgagcttctctctggcaatgcctgcgtttgcgctggtgttaag
aacgctcctatcgagaaccgtgcttcctctttcatgatcgccgagcgcttcaacctctcc
tggatgcaatccttcggtctgcgtctcttctacaacagcaagactgctgatggcgagttc
gacatggcaaaggctattaactctttccaagacgacatcgagcaagacaaggagcccgaa
cccgagagccccctgtggactctccttaagacctttgctacccgcgatttcaactggact
gaatccgaccgtctcggctggctccttacccgctctatctacttcactcatctcatctcc
ttcggccacgacgccgaggaaaagctcgaccaggcctcggtctccttcgcctcctcgctc
accgcccaaggccactgggtcccggccactttcgtccttctcacgctctccgaccccgtc
gcgcgcgagaccgccatccgcgatcacctcggccgtcacgcccacctcatcggctccttc
cacgaagccaagtcccccttctcggctctccgccgcttcggcatcaccgagtcctgggtc
tgggaagccaaggcgctcgacttccgcgccaaggaggaccaccgccaggagttcctcgct
ctcgtctgggcgggcaactacaaggaggccaacaccgccttcgtggagcgcgtcggtccc
gaccttgtcatcgagcgcgactggaagaggttggttaagttcgcgcagctgttgttcaag
gttaagggcaagctggggtctgttcaggagtgggaacgtggtggagcggcggtttacttg
ctttatccgcttaaggtcgcagcgttgaggaatcaattggctgcttctggagaagacgag
gaggaagagaagaggctggataggttgttggttgatggactggttgctctgggtgagagg
ctcagacatgtccctggtgcgacgggcgcgagtgatgtcaagagggaggcggccgtggcg
gatatggcggaggagctcatcaagggacgggtgaatggccagagcgagatgggaggcacg
ggtgctgatccgcggttgttcgggctgttgccggaggatgtgagggggaggtatatgagg
ggtatggcgcttgaggggatgtgttga
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integrated database retrieval system
