Sordaria macrospora: SMAC_00622
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Entry
SMAC_00622 CDS
T01610
Name
(RefSeq) uncharacterized protein
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
smp
Sordaria macrospora
Pathway
smp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SMAC_00622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smp03041
]
SMAC_00622
Enzymes [BR:
smp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SMAC_00622
Spliceosome [BR:
smp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
SMAC_00622
Complex C
U5 SnRNP specific factors
SMAC_00622
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
PRAI
Pet20
Motif
Other DBs
NCBI-GeneID:
10809656
NCBI-ProteinID:
XP_003352074
UniProt:
F7VLM9
LinkDB
All DBs
Position
Unknown
AA seq
730 aa
AA seq
DB search
MSTTSRREPPDLAALLRQKKEQEATAAKPRFIPKKERERLEAEKKAKEEEERKRKEESKS
QPNGTHNGNRNRMDGIQSHHHHNPQRHIPTGPKAMRYDEDWDPNGMSNGRDYRDNRDNRD
NRDNRNQRGAKRGAPNDDEDKRVKMEKNDEAELRARYMGPVVNQSTFSAKKKRRRTAANK
FNFDWDADDDTSRPFDPIYAERQEPLVRLGGYEMTEEMIMRKAEAIRRGDPETGEERARQ
YLEQHRRIKETEQRKNLGKHWSEKKLEDMKERDWRIFKENFGIATKGGAIPNPMRSWDES
TLPRRLLDIVKNVGYDEPTPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISEL
PPLTEYNKNDGPYALILAPTRELVQQIESEAKKFATPLGFTVVSIVGGHSLEEQAYALRN
GAEIIVATPGRLVDCLERRLLVFSQCCYTIMDEADRMIDQGFEEPLTKILDAMPVTNEKP
DTDDAENPQLMSRYVDGKDRYRQTMMYTATMPPIVERIAKKYLRRPAIVTIGNAGEAVDT
VEQRVEFVAGEDKRKKRLQEILNSGQFKPPIIVFVNIKRNCDMVARDIKHMGFSAVTLHG
SKTQEQREAALASLRNGQTDILVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTG
RAGKSGVAITFLGPEDNDVLYDLRQIISKSSISKVPDELRRHEAAQNKPQKGQKKLEESN
GYSGKGGSWN
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgacatcaagacgggaacccccagacctggcagcattgctgcgccagaagaag
gaacaggaagccaccgcggcgaaaccaagattcatccccaaaaaagaacgcgagaggcta
gaggccgaaaagaaggcgaaggaggaagaagagcgcaagcgcaaggaagaatccaagtct
caaccaaatggaacacacaacggcaaccgcaaccgcatggatggtatccagagccatcac
catcacaacccccaacgacacatcccaaccggtcccaaggcaatgcgatatgacgaagac
tgggaccccaacggcatgagcaacggccgcgactacagagacaaccgcgataacagggac
aaccgagataacaggaaccaacgtggcgcaaaacgcggcgcacccaacgatgacgaagac
aagcgagtcaagatggagaagaacgacgaggcagagctgcgcgcccggtacatggggcca
gtagtcaaccaatccacattctcagccaagaagaagaggaggaggacggcagcaaacaaa
ttcaactttgactgggatgccgatgatgacaccagccgaccattcgaccccatctacgca
gagcgtcaagagcctctggtcagacttgggggttacgagatgacggaagagatgattatg
cgaaaggccgaagccattcgtcgtggcgatcccgagacgggcgaggagcgtgccaggcaa
tacctcgagcaacacagacgcatcaaggagacggaacagcgcaagaacctgggcaagcac
tggtccgagaagaaactggaggatatgaaggagcgcgattggcgtatcttcaaggagaac
tttggcattgctaccaagggcggcgcaattcccaaccccatgcgcagttgggacgagtcg
acactgcctaggcgtcttctcgatattgtcaagaatgtgggttacgacgagccgacgcct
attcagagagctgctattcccatcgctcttcaagcacgcgacttgatcggtgtggctgtg
accggttccggtaaaacagcagctttcttgctgcctttgctggtttacatttccgagcta
ccacctcttaccgagtacaacaagaacgacggcccatatgcccttattctggcgccgaca
agagaactggtacagcagatcgagagcgaggcaaagaagtttgccacaccgctcgggttt
acggttgtcagtattgtcggtggtcactcgctcgaagagcaagcgtacgctctacgaaac
ggcgccgaaatcattgtcgccacacctggtcgtctggtggactgtctcgagagacgcctg
ctcgtcttctctcaatgctgctacacgattatggatgaagccgatcgcatgatcgaccaa
ggtttcgaagagccgcttacgaagatcttggacgccatgccggtaaccaacgaaaagcca
gacacggacgatgcggagaacccgcaactgatgagccgatacgtggacggcaaagatcgc
tacagacaaaccatgatgtacacggccaccatgcctccaatcgtggaacgcatcgccaag
aaatacctacgtcgtccggccatcgtcacgatcggaaacgcaggcgaggccgtcgacacg
gtcgagcagcgcgtcgagttcgtggccggcgaagataagcgcaagaagcgtctgcaggag
atcctcaactcgggccagttcaagccgcccatcattgttttcgtcaacatcaagcgcaac
tgcgacatggtggcgcgcgacatcaagcacatgggtttctcggcggtcactttgcacggt
tccaagacgcaggagcagcgtgaggcggcgctggcgtcgctgcgtaacgggcagacggat
atcctggtggccaccgacctggcgggccgtggtatcgatgtccccgacgtctcgctggtc
gtcaacttcaacatggctaccaacatcgagtcctacacgcatcgtatcggtcgtacgggt
cgtgcgggcaagagcggtgtggctatcacgttcttgggccccgaggataatgatgtgttg
tatgacttgaggcagatcatctccaagtcgtccatctccaaggtgccggatgagctcagg
agacatgaggctgcgcagaataagccacagaagggacagaagaagttggaggagagcaac
gggtatagcggaaagggcgggtcatggaactag
DBGET
integrated database retrieval system
