Sinorhizobium meliloti BL225C: SinmeB_0816
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Entry
SinmeB_0816 CDS
T01884
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
smq
Sinorhizobium meliloti BL225C
Brite
KEGG Orthology (KO) [BR:
smq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smq03016
]
SinmeB_0816
Enzymes [BR:
smq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SinmeB_0816
Transfer RNA biogenesis [BR:
smq03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SinmeB_0816
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
wHTH-Calcineurin_assc
Motif
Other DBs
NCBI-ProteinID:
AEG03747
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All DBs
Position
complement(861239..862390)
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AA seq
383 aa
AA seq
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MIQTTADLEAACRELARSSYITIDTEFLRETTFWPVLCLIQMASPEMAVIVDPMAPGIDL
APFFALMSNPDVVKVFHAARQDIEIIHHLGNLIPHPIFDTQVAAMVCGFGDSVSYDQLVN
RIKNEQIDKSSRFTDWSRRPLTDKQLDYALADVTHLRDIYQYLTKELDREGRSSWLAEEM
AILESRETYDLHPDNAWQRLKMRVKKPIELAVLQKVAAWREREARARNVPRGRIIKDDAI
YEIAQQQPKDAEALGRLRTIPKGWERSSAGTALIEAVGEALAIPRGELPRLPRQNHAPEG
AAAASELLKVLLKLISEKEGVAAKIIANSDDLDRIAAEGEGADVAALKGWRRELFGMTAL
KLINGEVALRFVDKKVEAMEIGG
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgattcaaacgacagcagatcttgaggccgcctgccgagagctggcccgttcaagctat
attacgatcgatacggagttcctgcgcgaaaccacgttctggccggtgctgtgcctcatt
cagatggcaagcccggaaatggcagtgatcgtcgatccgatggcacccgggatcgacctc
gccccgttcttcgcgctgatgagcaacccggatgtcgtgaaggtgttccacgccgccagg
caggacatcgagatcatccaccatctcggaaatctcattcctcatccgatcttcgatacg
caggtggccgcgatggtttgcggcttcggtgacagcgtgtcctatgaccagctcgtcaac
cgcatcaagaacgagcagatcgacaagtcgtcccgcttcaccgattggagccgcagaccg
ctcaccgacaagcagctcgactatgcgctggcggacgtgacgcatctgagggatatctac
cagtacctcaccaaggaactggatcgcgagggacgctcctcatggcttgcggaggaaatg
gcgatcctcgaaagccgggagacctacgatctccacccggacaatgcctggcagcggctg
aagatgcgggtgaagaaacccatcgagctcgccgtcctgcagaaggtggcggcgtggcgc
gaacgcgaagcgcgcgcccgcaacgtgccgcgcgggcgaattatcaaggatgatgcgatc
tatgagattgcgcagcagcagccgaaggatgccgaggcgctcggacgcctcaggaccatt
cccaagggctgggagcgctccagcgcggggacggccctcatcgaggcagtcggcgaagcc
cttgcgatcccgaggggcgagctgccgcgcctgccgcgccagaaccacgcacccgagggc
gctgcggcggcgagcgagctgctcaaggtgctgctgaaactcatctccgaaaaggaggga
gtcgcggccaagatcatcgccaacagcgacgatctcgacaggatcgcagccgagggcgaa
ggtgcggacgtcgccgcgctcaagggctggcggcgtgagctcttcggcatgacggcgctg
aaactcatcaacggcgaggtggcattgcgcttcgtcgacaaaaaagtcgaggcgatggaa
atcggcggttga
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