Sinorhizobium meliloti BL225C: SinmeB_1228
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Entry
SinmeB_1228 CDS
T01884
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
smq
Sinorhizobium meliloti BL225C
Brite
KEGG Orthology (KO) [BR:
smq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smq03032
]
SinmeB_1228
03400 DNA repair and recombination proteins [BR:
smq03400
]
SinmeB_1228
Enzymes [BR:
smq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SinmeB_1228
DNA replication proteins [BR:
smq03032
]
Prokaryotic type
DNA Topoisomerases
SinmeB_1228
DNA repair and recombination proteins [BR:
smq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SinmeB_1228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
CAP18_C
Motif
Other DBs
NCBI-ProteinID:
AEG04153
LinkDB
All DBs
Position
1303848..1306643
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AA seq
931 aa
AA seq
DB search
MTEQSTPGGGKNPPGIEPISIIEEMQRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYGM
SELGIDWNKKYVKCARVTGDVMGKYHPHGNTAIYDALARMAQDWSLRLPLIDGQGNFGSV
DGDPPAAERYTECRLQKAAHSLLDDLDKDTVDFRDNYDGTLHEPVVVPAKFPNLLVNGAG
GIAVGMATNIPPHNLVEVIDGCIALIDNPAIELPELMQIIPGPDFPTGALILGRSGIRQA
YETGRGSVIMRGRAHIEPMRGDREQIIITEIPYQVNKATMIEKMAELVREKRIEGISDLR
DESDRQGYRVVIELKRDANAEVILNQLYRYTPLQTSFGCNMVALNGGKPEQMTLLDMLRA
FVSFREDVVSRRTKYLLRKARERAHVLVGLAIAVANIDEVIKLIRQAPDPQTAREQLMER
RWPAHDVDALIRLIDDPRHRINDDATYNLSEEQARAILDLRLQRLTALGRDEIGDELNKI
GEEIKDYLDILSSRLRIMQIVKNELTAVRDEFGTPRRTEIAEGGPDMDDEDLIAQEDMVV
TVSHLGYIKRVPLTTYRAQRRGGKGRSGMATRDEDFVTRLFVANTHTPVLFFSSRGIVYK
EKVWRLPIGTPQSRGKALINMLPLEPGERITTIMPLPEDETTWENLDVMFSTTRGTVRRN
KLSDFVQVNRNGKIAMKLEEEGDEILSVDTCTEFDDVVLTTALGQCIRFPVADVRVFAGR
NSIGVRGISLGDGDRIISMAIVAHVEAEPWERAAYLKRSAAERRALTGEEEEIVLVGEEV
TNGGELTNERYEELKAREQFILTVSMKGFGKRSSSYDFRTSGRGGKGIRATDTSKTAEIG
ELVAAFPIEHNDQIMLVSDGGQLIRVPVEGIRLASRATKGVTIFSTAKDEKVVSVERITE
PDGDEEIEAVGAEGVMAEPESPPDTTSTPDE
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
ttgactgagcaaagcacccccggcggcggaaaaaatccgccaggcatcgagccgatttcc
atcatcgaggaaatgcagcggtcgtatctcgattacgccatgagcgtgatcgtgtcgcgt
gcgcttcccgatgtgcgcgacggtctcaaacccgttcaccgccgcatcctctacgggatg
agcgagctcggcatcgactggaacaagaaatacgtaaaatgcgcccgcgtcaccggtgac
gtgatgggtaaataccatccgcacggcaacacggcgatttacgatgcgctcgcacgcatg
gcgcaggactggtctctgcggctgccgctgatcgacggtcagggcaacttcggctccgtc
gacggcgatccgccggcggcggaacgttataccgagtgccggctgcagaaggcggcgcat
tcgctgctggacgatctcgacaaggacacggtcgatttccgcgacaactatgacggcacc
ttgcacgagcccgtcgtcgtcccggcaaagttcccgaacctgctcgtcaacggcgccggt
ggcatcgccgtcggcatggcgaccaatatcccgccgcataacctcgtagaggtgatcgac
ggctgtatcgccctgatcgacaatcccgcgatcgagctgccggagctgatgcagatcatt
ccgggaccggattttccgaccggggcgctgatcctcggccgttcgggcatccgtcaggcc
tacgagaccggccgcggctccgtcatcatgcgcgggcgtgcccatatcgagcctatgcgc
ggcgatcgcgagcagatcatcattaccgagatcccctatcaggtgaacaaggcgacgatg
atcgagaagatggccgagctcgtccgcgagaagcggatcgagggcatctccgatcttcgc
gacgaatccgaccgccagggctatcgcgtcgtcatcgaactgaagcgcgacgccaacgcc
gaagtgatcctcaaccagctttaccgctacacgcccctgcagacctccttcggctgcaac
atggtggcgctgaacggcggcaagccggagcagatgacgctgctcgacatgctgcgcgcc
ttcgtctccttccgcgaggacgtcgtcagccggcgcacgaaatacctgctgcgcaaggcg
cgcgagcgggcgcatgtgctggtcggtctcgcgattgccgtcgcgaatatcgacgaggtg
atcaagctcatccgccaggcgccggatccgcagaccgcgcgcgaacagctgatggagcgc
cgctggccggcgcacgacgtcgatgcgctcatccggctgatcgacgacccgcgccaccgg
atcaacgacgacgctacctataacctgtccgaagaacaggcccgcgcgatcctcgacctg
cgcctgcagcgcctgaccgcgctcggccgcgacgagatcggcgacgaactcaacaagatc
ggcgaggagatcaaggattacctcgacatcctgtcgtcccggctccgcatcatgcagatc
gtcaagaacgagcttaccgcggtccgggacgagttcggcacgccgcgccgcaccgagatc
gccgaaggcggtccggacatggacgacgaggacctgatcgcgcaggaggacatggtggtg
accgtgtcccatctgggctacatcaagcgtgtgccgctgacgacctatcgggcgcagcgc
cgcggcggcaagggccgctcgggcatggccacccgcgacgaggatttcgttaccaggctg
ttcgtcgccaatacgcacacgccggttctgttcttctcctcccgcggcatcgtctacaag
gagaaggtctggcggcttccgatcggcacgccgcagtcgcgcggcaaggcgctgatcaac
atgctgccgctggaacccggcgagcgcatcaccacgatcatgccgctgcccgaggacgag
acgacctgggaaaacctcgacgtcatgttctcgacgacccgcggcacggtccgtcgcaac
aagctctccgacttcgtccaggtcaaccgcaacggcaagatcgcgatgaagctcgaggag
gagggcgacgagatcctctcggtcgacacctgcaccgagttcgacgacgtggtgctcacg
acggcgctcggccagtgcatccgcttccccgtcgccgatgtccgcgtcttcgcgggccgc
aactcgatcggcgttcgcggcatttcgctcggtgacggcgaccggatcatctccatggcc
atcgtcgctcacgtcgaagccgagccgtgggagcgtgccgcctatctgaagcgatcggcc
gcggagcgtcgcgccttgaccggtgaagaagaggaaatcgtgcttgtcggcgaggaggtc
accaatggcggcgaactcaccaacgagcgctacgaggaactgaaggcgcgcgagcaattc
atcctgacggtctcgatgaaaggcttcggcaagcgttcctcgtcctatgacttccgtact
tcaggccgcggcggcaagggcattcgcgccaccgatacctcgaagacggcggaaatcggc
gaactcgtcgccgccttcccgatcgagcacaacgaccagatcatgctcgtttccgatgga
ggtcagctcatccgggtcccggtggaaggcattcgcctggcgagccgcgccaccaagggc
gtgaccattttctccaccgccaaggacgagaaggtcgtttcggtcgagcggatcactgag
ccggatggcgacgaggagatcgaagccgtaggtgccgaaggcgtcatggccgaaccggag
tcgccgccggacaccacgtcgacaccggacgagtga
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