Sinorhizobium meliloti BL225C: SinmeB_3348
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Entry
SinmeB_3348 CDS
T01884
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
smq
Sinorhizobium meliloti BL225C
Pathway
smq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SinmeB_3348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smq03019
]
SinmeB_3348
03016 Transfer RNA biogenesis [BR:
smq03016
]
SinmeB_3348
Enzymes [BR:
smq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SinmeB_3348
Messenger RNA biogenesis [BR:
smq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SinmeB_3348
Transfer RNA biogenesis [BR:
smq03016
]
Prokaryotic type
tRNA degradation factors
SinmeB_3348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
AEG06243
LinkDB
All DBs
Position
3550061..3552214
Genome browser
AA seq
717 aa
AA seq
DB search
MFETHKVEIEWAGRPLKLETGKIARQADGAVLATYGETVVLATVVSAKAPKPGQDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFPDGYKNDTQVIITVMQH
DLENNPDVVAMVAASAALTLSGVPFMGPVGGARVGYINGEYVLNPHLDEMDESTLDLVVA
GTQEAVLMVESEAKELPEDVMLGAVVFGQKGFQPVIDAVIRLAEVAAKEPREFNPEDHSA
LENAMLSIAEDELRNAYKITEKAARYAAVDAVKAKVKEHFLPEGVENPAHTAEEIAAVFK
HLQAKIVRWNILDTKSRIDGRDLVTVRPIVAEVGILPRTHGSALFTRGETQAIVVATLGT
GEDEQYVDSLTGMYKENFMLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIHPMLPTA
EQFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLIKEDDRFAVL
SDILGDEDHLGDMDFKVAGTDAGITSLQMDIKIEGITEEIMGVALNQAKGGRLHILGEMA
KAISESRGQLGEFAPRIEVMNIPVDKIREVIGSGGKVIREIVEKTGAKINIDDDGTVKIA
SASAKEIEAARKWIHSIVAEPEVGQVYEGTVVKTADFGAFVNFFGARDGLVHISQLASER
VAKTTDVVKEGDKVWVKLMGFDERGKVRLSMKVVDQATGKEVVAEKSEKKDGGEAAE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagacacacaaggtagaaatcgaatgggctgggcgtccgctcaagctcgaaacc
ggaaaaatcgcgcgtcaggccgatggtgccgttctcgcgacctacggcgaaaccgtcgtg
ctcgccacggtggtttcggcgaaggcaccgaagccaggccaggatttcttcccgctcacc
gtcaactatcaggaaaagacctacgctgcgggcaagatccccggcggctatttcaagcgt
gagggccgccccagcgaaaacgagacgctggtgtcgcgtctgatcgaccggccgatccgt
ccgctcttcccggacggctacaagaacgacacccaggtcatcatcacggtcatgcagcat
gacctcgagaacaacccggacgtcgtcgcgatggttgcggcatccgctgcattgacgctt
tccggcgttcccttcatgggtccggtcggcggtgcccgcgtcggctacatcaacggcgaa
tacgttctcaacccgcatctcgacgaaatggacgaatccacgctcgacctcgtcgtcgcc
ggcacgcaggaagcggtgctgatggtggaatcggaagcgaaagagctgccggaagatgtc
atgctcggcgccgtcgttttcggccagaagggcttccagccggtgatcgacgctgtcatc
aggcttgcggaagttgccgccaaggagccgcgcgaattcaatccggaagatcactccgct
ctcgaaaatgcgatgctctcgatcgccgaagacgagctgcgcaacgcctataagatcacc
gagaaggccgcgcgctatgccgccgtcgatgcggtaaaggcaaaggtcaaggagcatttc
ctgccggaaggcgtcgagaacccggcccataccgccgaagagattgccgctgtcttcaag
cacctgcaggccaagatcgttcgctggaacatcctcgacacgaagagccgcatcgatggc
cgcgacctcgtcacggttcgcccgatcgtcgccgaagtcggcatcctgccgcgcacgcac
ggttcggcgctctttacccgcggtgaaacgcaggcgatcgtcgttgccacgctcggcacc
ggcgaagacgagcagtatgtcgattccttgactggcatgtacaaggaaaacttcatgctg
cattacaacttcccgccctattcggtcggtgaaaccggccgcatgggttctccgggccgc
cgcgaaatcggccacggcaagctcgcctggcgcgccatccatccgatgctgccgaccgcg
gaacagttcccctacacgctgcgcgtcgtttccgagatcaccgagtccaacggttcgtcc
tccatggcaaccgtctgcggcacgtcgctcgcactgatggacgcgggcgttccgctcgcc
aagccggttgccggcattgccatgggcctcatcaaggaagacgaccgtttcgccgtcctc
tccgacattctcggcgatgaagaccacctcggcgatatggacttcaaggtcgcgggcacg
gatgccggcatcacctcgctgcagatggacatcaagatcgaaggcatcaccgaagaaatc
atgggtgttgccctcaaccaggccaagggaggccgcctgcacattctcggcgaaatggcc
aaggccatctccgagagccgcggccagctcggcgagttcgcaccgcgcatcgaagtcatg
aacattccggtcgacaagattcgtgaagtcatcggctcgggcggcaaggtcatccgcgaa
atcgtcgaaaagaccggcgccaagatcaatatcgacgacgacggcaccgtcaagattgcg
tcggcttccgccaaggagatcgaggccgcccgcaagtggatccactcgatcgtcgccgag
ccggaagtcggtcaggtctatgaaggcactgtcgtcaagacggccgatttcggcgccttc
gtcaacttcttcggcgcccgcgacggcctcgtccacatctcgcagctcgcttccgagcgc
gttgccaagaccaccgacgtcgtcaaggaaggcgataaggtctgggtcaagctgatgggc
ttcgacgagcgcggcaaggttcgtctctccatgaaggtcgtagaccaggcgaccggcaag
gaagtcgttgccgagaagagcgaaaagaaggacggcggcgaagccgccgagtaa
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