Sinorhizobium meliloti BL225C: SinmeB_3367
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Entry
SinmeB_3367 CDS
T01884
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
smq
Sinorhizobium meliloti BL225C
Brite
KEGG Orthology (KO) [BR:
smq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smq03016
]
SinmeB_3367
Enzymes [BR:
smq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SinmeB_3367
Transfer RNA biogenesis [BR:
smq03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SinmeB_3367
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AEG06261
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All DBs
Position
3571014..3571640
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AA seq
208 aa
AA seq
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MANTIRFHEGDISETDAARYTGAIAIDTETLGLVPRRDRLCVVQLSSGDGTADVIRISAG
QKQAPNLVSMLADPTRQKIFHFGRFDIAVLFHTFGVTASPVFCTKIASRLARTYTDRHGL
KDNLKELLDIDISKQQQSSDWAADILSPAQLEYAASDVLHLHALRDKLTARLLRDGRMEL
AEACFSFLPTRAKLDLLGWEEADIFAHS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatacaataaggttccacgagggcgacatttccgagaccgacgccgcccgctat
acgggcgcgatcgcgatcgatacggaaacgctcggcctggtcccgcgtcgcgaccgcctt
tgcgtcgtgcagctctcgtccggcgacgggactgccgatgtgatccgcatctccgccggc
cagaagcaggcgccgaacctcgtctcgatgctcgccgatccgacgcgccagaagatcttc
catttcggccgcttcgacatcgccgtgctgttccataccttcggcgtcaccgcgtcgccg
gtcttctgcaccaagatcgcctcgcgcctcgcccgcacctatacggaccggcacggtctc
aaggacaatctcaaggaactgctcgacatcgacatttccaagcagcagcagtcttccgat
tgggccgccgacattctttcgccggcgcagctcgaatatgccgcctccgacgtgctccac
ctgcatgcgctgcgcgacaagctgacggcgcggctcctgcgcgatggccggatggaactc
gccgaggcctgcttctcgtttctccccacgcgtgccaagctcgatctgctcggctgggaa
gaggcggacatcttcgcgcatagctga
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