Sinorhizobium meliloti BL225C: SinmeB_4952
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Entry
SinmeB_4952 CDS
T01884
Name
(GenBank) DNA topoisomerase I catalytic core domain protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
smq
Sinorhizobium meliloti BL225C
Brite
KEGG Orthology (KO) [BR:
smq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smq03032
]
SinmeB_4952
03400 DNA repair and recombination proteins [BR:
smq03400
]
SinmeB_4952
Enzymes [BR:
smq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SinmeB_4952
DNA replication proteins [BR:
smq03032
]
Prokaryotic type
DNA Topoisomerases
SinmeB_4952
DNA repair and recombination proteins [BR:
smq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SinmeB_4952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AEG09216
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All DBs
Position
pSINMEB02:1603519..1604661
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AA seq
380 aa
AA seq
DB search
MARATSVDVLECPPCVIADGPRHLAAAGLVPEETGLVYVSDSEPGIRRQRRGKGFVYRMP
DGSIVTDPSIKSRIAALGLPPAYDNVWICLEERGHLQATGYDARGRKQYRYHSEWQALRS
ADKFAQLVEFGKALPKIRRTIRRHMQGDVENMQTVLAALVALLDEAHLRTGNQAYVQANG
SYGATTLLKRHLRLGDGFIELKFIGKGGKRVQRLLRRPKLQQLLEEIADLPGRQLFVWKD
ENDVLRPVDSGRLNRYLSDVAGTAVSAKTFRTWGGTLAAFTAARTSIEQGEWPTIKQMSE
AAASVLHNTPAISRSSYIHPDVLALADKSASISARQLQARGRLDSELRVEEQRLLSFLQR
SARSRARQAKSVAEERRASS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggctagagcaacgtcggtcgacgtgctcgaatgtccgccttgcgtgattgcggatggt
ccgcggcacttggcggcggccggtctcgtgcccgaggaaaccggactcgtctatgtcagc
gacagcgaaccgggcatccggcggcaaaggcgcggcaaggggtttgtctaccgaatgccg
gacggctcgatcgttaccgatccgtcgatcaaaagccgcatagcggcgctgggcctgccg
cctgcctatgacaacgtctggatctgcctcgaagaacgggggcatctgcaggccacgggc
tacgatgcgcgcggacgaaaacagtaccgctatcacagcgagtggcaggctctcaggagc
gccgacaaattcgcgcaactggtggaattcggcaaggcattgcccaagatacgccgcacc
atacggcgccacatgcagggcgacgtggaaaacatgcaaaccgtgctcgctgcgctggtg
gccctgctggacgaagcccatctgcgcaccggcaaccaggcttatgtgcaggccaatggg
agctatggtgccacgacgctgctgaagcggcatctcaggctgggcgatggcttcatagag
ctgaaattcatcggcaagggcggcaagcgcgtccagcgcctgctccgccgccccaaattg
cagcagttgctcgaagagatcgcggatctgccgggcagacagcttttcgtttggaaggat
gaaaacgacgtcctgcggccggtcgattccgggcggctcaaccggtacctttcagatgtg
gccggaacagcggtttctgcaaagacattccggacctggggcggcactctcgcggctttc
acggccgcccggacttcgatcgaacagggcgagtggccgacgatcaaacagatgagcgaa
gcggctgcgtccgttcttcacaacacccccgccatcagccggagcagctacattcatccc
gatgtgctcgctctcgccgacaagtcggcctcgatctcggcacggcagcttcaggcgcgc
gggcgcttggacagcgaactgcgtgtggaggaacagcgcttgctgagctttcttcagcgc
tcggcgcgctccagggcgcggcaggcaaaatcggtcgcagaagagcggcgagcttccagc
taa
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