Sinorhizobium meliloti BL225C: SinmeB_4989
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Entry
SinmeB_4989 CDS
T01884
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
smq
Sinorhizobium meliloti BL225C
Pathway
smq03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
smq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SinmeB_4989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smq03400
]
SinmeB_4989
DNA repair and recombination proteins [BR:
smq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
SinmeB_4989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AEG09252
LinkDB
All DBs
Position
pSINMEB02:complement(1639227..1640045)
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AA seq
272 aa
AA seq
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MAPPRPYWKGYLKLSLVTCPVSMMPATSESEKVRFHTLNRKSNNRVVSRYVDAVTGKEVD
EDDEVKGYERGENDFLVIEDEELESVALESARTIDIEKFVPRDTIEWIWLEKPHYLTPSD
EVGHEAFSVIRDAMVAEKVAGISRLVIGRRERAVMLEPCGKGIVVWTLRYGDEVRKPENY
FADIGDGDNDPKLMSLVTSLIEERSKPWNPNMVSDPVQEKLLEIIESKRKSAKKVAKPKA
KEGEPVHAGNVIDLMAALKGSLEKKKPGGKKS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccccacgcccatactggaaaggctacctgaagctctcgctcgtcacctgcccc
gtctcgatgatgccggcgaccagcgagtccgagaaggtccgcttccacacgctcaaccgc
aagtccaacaaccgcgtcgtgtccaggtatgtcgatgcggtgaccggcaaggaggtcgac
gaagacgacgaggtgaaaggttacgagcgcggtgaaaacgatttcctcgtgatcgaggac
gaagagctggagagtgtcgctctcgaaagtgcgaggacgatcgacatcgagaaattcgtt
ccgcgcgatacgatcgaatggatctggctggagaagcctcactaccttacgccttcggac
gaagtcggccacgaagcattcagcgtgatccgcgacgccatggtagccgagaaggtcgcc
ggcatttcccggctcgtgatcggccgccgcgaacgagccgtgatgctagaaccgtgcggc
aaaggcatcgtcgtatggacccttcgctatggcgacgaggtgcgcaagccggagaactat
ttcgccgatatcggcgatggggataacgatccgaaactgatgagcctcgtcacctcgctg
atcgaagagcgcagcaaaccgtggaatcccaacatggtcagcgatcccgttcaggaaaag
ctgctcgaaattatagaaagcaagcggaagtcggcgaagaaggtagccaagccgaaagcc
aaggagggagagccggtccacgccgggaacgtcatcgacctcatggcggcgctcaaggga
agcctcgagaaaaagaaacccgggggcaagaagtcttaa
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