Sinorhizobium meliloti BL225C: SinmeB_5464
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Entry
SinmeB_5464 CDS
T01884
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
smq
Sinorhizobium meliloti BL225C
Pathway
smq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SinmeB_5464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smq03019
]
SinmeB_5464
03110 Chaperones and folding catalysts [BR:
smq03110
]
SinmeB_5464
03029 Mitochondrial biogenesis [BR:
smq03029
]
SinmeB_5464
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smq04147
]
SinmeB_5464
Enzymes [BR:
smq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SinmeB_5464
Messenger RNA biogenesis [BR:
smq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SinmeB_5464
Chaperones and folding catalysts [BR:
smq03110
]
Heat shock proteins
HSP60 / Chaperonin
SinmeB_5464
Mitochondrial biogenesis [BR:
smq03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SinmeB_5464
Exosome [BR:
smq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SinmeB_5464
Exosomal proteins of other body fluids (saliva and urine)
SinmeB_5464
Exosomal proteins of breast cancer cells
SinmeB_5464
Exosomal proteins of colorectal cancer cells
SinmeB_5464
Exosomal proteins of bladder cancer cells
SinmeB_5464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AEG06717
LinkDB
All DBs
Position
pSINMEB01:complement(395222..396856)
Genome browser
AA seq
544 aa
AA seq
DB search
MSAKQIVFSTDARDRLLRGVELLNNAVKVTLGPKGRNVVIDKSYGAPRITKDGVSVAKEI
ELEDKFENMGAQMVRAVASKTNDLAGDGTTTATVLAASIFREGAKLVSVGMNPMDLKRGI
DLGVAAVLAEIKARATKVISSSEIAQVGTIAANGDAGVGEMIARAMEKVGNEGVITVEEA
RTADTELDVVEGMQFDRGYLSPYFVTNAEKMRVELEDPYILIHEKKLGSLQAMLPILEAA
VQSGKPLLIISEDVEGEVLATLVVNRLRGGLKIAAVKTPGFGDRRKAMLEDIAVLTAGQM
ISEDLGIKLENVTLDMLGRARRVLIEKDTTTIIDGSGDKASIQARVSQIKAQIEETASDY
DKEKLQERLAKLAGGVAVIRVGGATELEVKEKKDRIDDALNATRAAVEEGIVPGGGVALL
RAKSALVGLTDDNADVTAGISIVRRALEAPIRQIADNAGVEGSIVVGKLVDGRDHNQGFD
AQTETYVDMIKAGIVDPAKVVRTALRDAGSIASLLITAEAMIADIPERGSPQSTGNGAVD
SMGY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccaaacaaatagtcttctccactgacgcccgcgatcgcctgcttcgcggcgtg
gaattgctcaacaatgccgtcaaggtgacactcggcccaaagggccgcaatgtcgttatc
gacaagtcctatggcgctccacgcattaccaaagacggcgtctctgtcgccaaggaaatc
gaacttgaagacaagttcgaaaatatgggtgcgcagatggtgcgcgcggtagcctcgaag
accaatgaccttgccggcgacggcaccacgacggcgaccgtgctcgccgcgtccatcttt
cgcgaaggcgccaagctggtttcggtgggcatgaacccaatggacctaaagcgcggcatc
gatcttggggttgccgctgtcctcgcggaaatcaaggcgcgcgcgacgaaggtcatctcg
tcgagcgagatcgctcaggtcggcacgatcgccgccaatggcgacgccggcgtcggcgag
atgatcgcaagggcgatggagaaggttggcaacgagggtgtcattaccgtcgaagaggcc
aggacggccgataccgaactcgacgtcgtcgagggcatgcagttcgaccgcggttatctc
tcgccgtatttcgtgaccaatgccgagaagatgcgcgtggaactggaggatccctacatc
ctcattcacgagaagaagctcggcagcctgcaggctatgctgcctatcctggaggccgcg
gtgcagagcgggaaaccgttgctgatcatctccgaagacgtcgaaggcgaagtgctggcg
acgctcgtcgtcaacaggctgcgaggtggcctgaagatcgcggcagtcaagacgccaggt
ttcggcgaccgccgcaaggccatgctggaagacattgccgttttgacggccggccagatg
atctccgaggatctcggcatcaagcttgagaatgtcacgctcgatatgcttggccgcgcc
aggcgggtgctgatcgagaaagacacgaccacaatcatcgacggctccggcgacaaagcc
tccattcaggcgcgcgtcagccaaatcaaggcgcagatcgaggagacggcgtccgactac
gacaaggaaaagctgcaggagcggttggcgaaactcgccggcggcgtcgcggttatccgc
gtcggcggcgcgaccgagcttgaagtgaaggaaaagaaggaccgcatcgacgatgccctg
aacgctacgcgcgcggcggtcgaagaaggcatcgttcccggcggcggggtggcgctgctc
cgagcaaaatcggcccttgtcggtctcaccgacgataacgccgacgtaacggcaggcatc
tcgatcgtgcgccgagccctggaagcaccaatccgccagatcgccgacaatgccggtgtg
gaaggttcgatcgttgtcggaaagcttgtcgacggcagggatcacaaccaagggttcgac
gcacagacggaaacctatgtcgatatgatcaaggccggcatcgtcgatcccgccaaggtc
gtacggacagcattgcgggacgctggctcgatcgcgtcacttctgatcaccgccgaagcc
atgatcgccgatattcccgagagagggtctccccaaagcacaggaaacggcgccgtggat
agtatgggatactga
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