Sinorhizobium meliloti BL225C: SinmeB_5541
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Entry
SinmeB_5541 CDS
T01884
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
smq
Sinorhizobium meliloti BL225C
Pathway
smq03030
DNA replication
smq03430
Mismatch repair
smq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SinmeB_5541
03430 Mismatch repair
SinmeB_5541
03440 Homologous recombination
SinmeB_5541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smq03032
]
SinmeB_5541
03400 DNA repair and recombination proteins [BR:
smq03400
]
SinmeB_5541
Enzymes [BR:
smq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SinmeB_5541
DNA replication proteins [BR:
smq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SinmeB_5541
DNA repair and recombination proteins [BR:
smq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SinmeB_5541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AEG06790
LinkDB
All DBs
Position
pSINMEB01:471336..472313
Genome browser
AA seq
325 aa
AA seq
DB search
MTSQLDMFARDVRPAAARAEASRARRQTSTSFSETEMLAALKATGRYRILRKLEARTVAS
EVRPGFPLRGVILDTETTGLDARKCEIIEIGLVSFTYNEEGEIGDVVAIYGGLQQPTIAI
PPDITRLTGITDAMVAGQSIDIAAVQAIVGPADLIIAHNAGFDRPFCEAFSDVFVRKAWA
CSVSEIDWSGRGFEGTKLGYLIGQSGYFHDGHRAVDDCFALLEVLEQSSGGAALPPFAEL
YKTSQRSRVRIFAENAPFDLKDVLKARGYRWSDGSDGRPKSWWIEVAEEELEAELGFLRK
EIYRWDEADPPTQRLTAFDRYRARR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgacctctcagctcgacatgtttgcccgagatgtgcgaccagcagccgcgagagccgag
gcaagccgtgcccggcggcagacgtcgacatccttctccgaaaccgagatgcttgccgcg
ttgaaggcgacgggtcgctacaggatcttgcgaaagcttgaagctcgcacggtcgcatcc
gaggtgaggcccggttttcccctgaggggcgtcatcctcgacactgagacgaccgggctc
gatgcccgcaaatgcgagatcatcgagatcgggcttgtctcgttcacctacaacgaggag
ggcgagatcggcgatgtggtagctatttatggcggtttgcagcagccgaccattgccatt
ccacccgacatcacccggttgacgggtatcaccgatgccatggttgccggccagtcgatc
gatattgctgcagtccaagcaatcgttgggcctgcggatctcatcatcgcccacaatgcc
ggcttcgatcggccgttttgcgaagcgttttcggatgtgtttgtccgcaaggcctgggcg
tgctcggtttccgaaatcgattggagtggccgaggctttgaaggcacgaagctcggctat
ctgatcggtcagagcggatatttccacgacgggcatcgggctgtagatgactgttttgct
ctcctcgaggtcctggaacagtccagtggtggcgccgcactgccgccgtttgccgaactt
tacaaaacgagccagcgttcacgggtgaggattttcgcggagaatgcgccgttcgacctg
aaggacgtgctgaaggctcgcgggtaccgctggtccgatggcagcgacggccgcccaaaa
tcctggtggatagaggtcgccgaggaggagctcgaggctgaactcggcttccttcggaag
gagatctatcgctgggacgaggcagatcctccgacgcagcggctgacggctttcgacaga
tacagagcgcgaagatag
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