Sinorhizobium meliloti BL225C: SinmeB_5887
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Entry
SinmeB_5887 CDS
T01884
Name
(GenBank) transcriptional regulator, LysR family
KO
K14657
LysR family transcriptional regulator, nod-box dependent transcriptional activator
Organism
smq
Sinorhizobium meliloti BL225C
Module
smq_M00664
Nodulation
Brite
KEGG Orthology (KO) [BR:
smq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smq03000
]
SinmeB_5887
Transcription factors [BR:
smq03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SinmeB_5887
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
AEG07078
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All DBs
Position
pSINMEB01:817848..818843
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AA seq
331 aa
AA seq
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MRFRGLDLNLLVALDALMTERKLTAAARRVKLSQPAMSAAIARLRTYFGDELFSMQGREL
IPTPRAEALAPAVRDALLHIQLSVIAWDPINPAQSDRRFRIILSDFMTLVFFERVVERLA
REAPGVSFELLPLDDDPYELLRRGDVDFLVLPDLFMSSAHPKAKLFTEALVCVGCPTNEQ
LLGELSFEKYMSMGHVAAQFGRALKPSFEQWLLLEHGFKRRVELVVPGFTLIPPLLPGTN
RIAIIPLRLVKYFEQTIPLRIVKHPLPPLWFTEAVQWPALHNKDPGNIWMREILLQEASR
SEFQGETSLERADAANMSGTSGSPPRCRPAR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttaggggcctagatctaaacctcctcgtcgcgctcgacgcactgatgaccgag
cgcaagctcacggccgccgcacgccgggtgaagctcagtcagccggccatgagcgcggct
atcgcgcgcctgcgcacctattttggcgacgagctgttttcgatgcagggccgcgaactt
atcccgacaccgcgtgccgaggcacttgcgccagccgtgcgcgacgccctgctgcacatt
cagctctccgtcattgcttgggatccgatcaacccagcccagtcggatcgccgtttcagg
atcattctttcggacttcatgacactcgtattctttgagagggttgtggagcgcttggct
cgggaggctcctggcgtcagcttcgagttgctgcctctagacgacgatccctatgagctt
ctccggcgcggtgatgtcgattttttagttcttccggacttgttcatgtcgagtgcgcac
cccaaagcgaagctgtttaccgaggcactcgtgtgcgtcggctgcccgacgaatgagcag
ttgctaggggaactctctttcgagaaatacatgtcgatggggcatgttgcagcccagttc
gggcgtgcgttgaagccctccttcgagcaatggctattactggagcacgggttcaagaga
cgtgtcgaacttgtcgtgccaggttttactttgattccgccgttgctgccgggcaccaat
cgtatagccattatcccattgcgtctggtcaagtatttcgaacaaacgatacccctgcgg
atcgtcaaacacccgctgccacccctctggttcactgaggctgtccagtggcccgccctc
cataacaaggatcccggaaatatctggatgcgggagatactcctgcaggaagcctcgcgc
agcgaatttcagggagaaacgtctttagaacgagctgacgcagcgaacatgtccggtacg
tccggctctccaccacgatgtcgcccagcgcgctga
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