Sinorhizobium meliloti BL225C: SinmeB_6024
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Entry
SinmeB_6024 CDS
T01884
Name
(GenBank) transcriptional regulator, NifA, Fis Family
KO
K02584
Nif-specific regulatory protein
Organism
smq
Sinorhizobium meliloti BL225C
Pathway
smq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
smq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SinmeB_6024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smq03000
]
SinmeB_6024
Transcription factors [BR:
smq03000
]
Prokaryotic type
Helix-turn-helix
Other families
SinmeB_6024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
GAF
AAA_2
AAA
GAF_2
nSTAND3
AAA_3
TIP49
CBP110
AAA_22
HTH_23
TsaE
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AEG07179
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Position
pSINMEB01:complement(936107..937732)
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AA seq
541 aa
AA seq
DB search
MRKQDKRSAEIYSISKALFAPTRLEITLNNFVNSLSLVLRMRRGGLEIPASEGETKITAA
TRNSGSPSAADYTVPKAAIDQIMTAGRLVVPDVCNSELFKDQIKWHRIGPTAFIAAAVEV
DHETGGMLWFERAKESGYDYEEDVHLLSRAADLAGMAIRLHRTISGRGRTFAEEQEEQQN
SRDEQSQSSARQRLLKNDGIIGESTALMAAVDTAKVMAETNSIVLLRGETGTGKECFAKL
IHQHSTRQKKPFIKFNCPALSESLLESELFGHEKGAFTGAIAQRVGRFESANGGTLLLDE
IGEIPPAFQAKLLRVIQEGEFERVGGTKTLKVDVRLIFATNKDLEMAVQNGEFREDLYYR
ISGVPLILPPLRHRDGDIPLLARAFLQRFNEENGRDLHFAPSALDHLSKCKFPGNVRELE
NCVRRTATLARSKTITSSDFACQTDQCFSSRLWKGVHCSHGHIEIDAPAGTTPLLGAPAN
DVPPKEPGSAGVASNLIERDRLISALEEAGWNQAKAARILKKTPRQVGYALRRHGVDVRK
L
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaacaggacaagcggtccgccgaaatttacagcatatcaaaggctctgtttgcc
cccactcgtcttgagatcacgctgaacaatttcgtgaatagcctctctttggttctgcgc
atgcgccgcggcggactcgagattccggcgtcggaaggagagacaaagatcacagcggct
acccgcaacagcgggtctccttctgccgctgactatacggtaccaaaggccgcaatagac
caaatcatgactgccgggcggctggtcgtaccagacgtttgcaactcggagctgttcaag
gatcagataaaatggcacagaattggtccgacggcctttatcgctgcggcggtggaggtc
gatcatgaaacgggcggaatgctgtggttcgagcgcgccaaagagtccggttatgactat
gaggaggatgtgcaccttctttcgagggccgccgatcttgcgggcatggccattcggctt
catcgcactatcagcgggcgtgggcggacatttgccgaagagcaggaagaacagcaaaat
tcacgtgatgagcagagccagagttccgcccgccagcggctgctcaagaatgacgggatc
atcggggaaagtaccgccctcatggcggcggtagataccgccaaagtcatggcagagacc
aattcaatcgttctccttaggggagaaacaggaactggcaaggaatgctttgcgaagcta
atccaccagcattcgactcggcaaaaaaagcccttcatcaagttcaattgccccgcgctg
tctgaaagccttctcgaatcagagctgtttggacatgagaaaggtgcgttcaccggggct
attgctcaacgcgtaggccgtttcgaatcggcgaatggcggaacgttgctgctcgatgaa
atcggcgagattcccccggcgttccaagcaaaactgctacgcgtaatacaggaaggtgaa
tttgagcgagtcggcggcacaaagacgctgaaagtcgacgtccggctcatattcgccaca
aataaggatctcgaaatggcggtccagaatggggagttcagggaagacctttactaccgc
atcagcggggtgcccctcattttgccgccacttaggcaccgcgacggtgacattccgctc
cttgcaagagcattccttcagcggttcaacgaagagaacggtcgtgatctccatttcgcg
ccgtctgcgcttgaccacttgtcgaagtgcaagttccctggaaacgttcgcgagctggaa
aactgtgtgcggaggactgcaactctcgccaggtcaaagacgatcacttcgtcagatttc
gcctgccaaacggaccagtgtttttcttctcgcctctggaaaggcgttcactgttcgcat
ggccacattgagatcgatgcgcccgcgggtacaacaccgttgctcggagcgccagccaat
gatgttccgccgaaagagcccggatccgcaggagtggcatccaatctgatcgagcgcgac
cggttgatcagtgcgctggaggaggccggttggaatcaggcaaaggcagctcgcatcctc
aaaaaaacgccccggcaggtcgggtatgctttacgtcggcatggtgtggacgtgagaaag
ctctaa
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